Escherichia coli VE-F10 |
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Putative Escherichia coli VE-F10 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36547
| Sequence length: | GenBank #: | |
| Chromosome: | 4,699,252 bp | AP027946 |
| plasmid pVE-F10_1: | 229,662 bp | AP027947 |
REBASE acronym: EcoVEF10
Org_num: 66551
All begin VEF10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18020 | 388 aa hypothetical protein | |||
| 18030 | M | M.EcoL621ORF9315P (100% identity) | M.EcoVEF10ORF18030P | |
| 18040 | S | S.EcoSF10ORF5825P (100% identity) | S1.EcoVEF10ORF18030P | |
| 18050 | UPF0149 family protein YecA | |||
| 18060 | 336 aa hypothetical protein | |||
| 18070 | R | EcoGD33ORF9555P (100% identity) | EcoVEF10ORF18030P | |
| 18080 | SprT family zinc-dependent metalloprotease | |||
| 27880 | GTPase family protein | |||
| 27890 | M | M.EcoXD35ORF18215P (100% identity) | M.EcoVEF10ORF27890P | |
| 27900 | S | S.Eco14C22ORF25665P (67% identity) | S.EcoVEF10ORF27890P | |
| 27910 | R | EcoET207ORF15120P (100% identity) | EcoVEF10ORF27890P | |
| 27920 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3220 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVEF10DamP |
| 3240 | ribulose-phosphate 3-epimerase | |||
| 4390 | multidrug efflux transporter transcriptional | |||
| 4400 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoVEF10ORF4400P |
| 4410 | DNA-binding transcriptional regulator Fis | |||
| 6450 | 681 aa hypothetical protein | |||
| 6460 | RM | SflLIN17ORF3140P (100% identity) | EcoVEF10ORF6460P | |
| 6470 | 116 aa hypothetical protein | |||
| 17380 | 142 aa hypothetical protein | |||
| 17390 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoVEF10DcmP |
| 17400 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoVEF10DcmP |
| 17410 | drug/metabolite exporter YedA | |||
| 21440 | 127 aa hypothetical protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoVEF10ORF21450P | |
| 21460 | 60 aa hypothetical protein | |||
| plasmid pVE-F10_1 | ||||
| 44520 | 55 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoVEF10ORF44530P |
| 44550 | thermonuclease family protein | |||
| 45370 | 108 aa hypothetical protein | |||
| 45380 | M | M.YpsF1ORFBP (100% identity) | M.EcoVEF10ORF45380P | |
| 45390 | 202 aa hypothetical protein | |||
| 45690 | DNA-binding protein | |||
| ??? | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoVEF10ORF45700P |
| 45710 | 85 aa hypothetical protein | |||