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Putative Escherichia coli RHB28-SO-C04 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Sequence length: | GenBank #: | |
Chromosome: | 4,480,841 bp | CP099142 |
plasmid unnamed2: | 44,007 bp | CP099144 |
REBASE acronym: Eco28SOC04
Org_num: 66480
All begin NFK37_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5245 | GTPase family protein | |||
5250 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco28SOC04ORF5250P | |
5255 | S | S.Eco41C07ORF5215P (100% identity) | S.Eco28SOC04ORF5250P | |
5260 | R | Eco819ORF3430P (100% identity) | Eco28SOC04ORF5250P | |
5265 | transposase domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1695 | cell division protein DamX | |||
1700 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco28SOC04DamP |
1705 | ribulose-phosphate 3-epimerase | |||
2320 | DUF2556 family protein | |||
2325 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco28SOC04ORF2325P |
2330 | DNA-binding transcriptional regulator Fis | |||
8755 | phosphohydrolase | |||
8760 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco28SOC04DcmP |
8765 | V | V.SflSTLE1DcmP (100% identity) | V.Eco28SOC04DcmP | |
8770 | drug/metabolite exporter YedA | |||
plasmid unnamed2 | ||||
22030 | IS1 family transposase | |||
22035 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Eco28SOC04ORF22035P |
22040 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | R1.Eco28SOC04ORF22035P |
22045 | IS1380-like element ISEcp1 family transposase | |||
22050 | IS5-like element ISKpn26 family transposase | |||
22055 | extended-spectrum class A beta-lactamase | |||
22060 | WbuC family cupin fold metalloprotein | |||
22065 | R | Ssp3CORF24390P (49% identity) | R2.Eco28SOC04ORF22035P | |
22070 | recombinase family protein |