Escherichia coli RHB21-E1-C08 |
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Putative Escherichia coli RHB21-E1-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,916,157 bp | CP099186 |
| plasmid unnamed1: | 89,997 bp | CP099187 |
REBASE acronym: Eco21E1C08
Org_num: 66466
All begin NFK12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20445 | 322 aa hypothetical protein | |||
| 20450 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco21E1C08ORF20455P |
| 20455 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco21E1C08ORF20455P |
| 20460 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco21E1C08ORF20455P |
| 20465 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco21E1C08DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2225 | DUF2556 family protein | |||
| 2230 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco21E1C08ORF2230P |
| 2235 | DNA-binding transcriptional regulator Fis | |||
| 4300 | 5-nucleotidase | |||
| 4305 | R | Eco747ORF23885P (100% identity) | Eco21E1C08ORF4305P | |
| 4310 | integrase | |||
| 9625 | phosphohydrolase | |||
| 9630 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.Eco21E1C08DcmP |
| 9635 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco21E1C08DcmP |
| 9640 | drug/metabolite exporter YedA | |||
| 11615 | DUF977 family protein | |||
| 11620 | M | M.Eco21E1C02ORF11620P (100% identity) | M.Eco21E1C08ORF11620P | |
| 11625 | 139 aa hypothetical protein | |||
| 14695 | 92 aa hypothetical protein | |||
| 14700 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco21E1C08ORF14700P | |
| 14705 | TrmB family transcriptional regulator | |||
| 15525 | replication endonuclease | |||
| 15530 | M | M.EcosBORF4330P (100% identity) | GATC | M.Eco21E1C08ORF15530P |
| 15535 | TraR/DksA family transcriptional regulator | |||
| 17260 | DUF1317 domain-containing protein | |||
| 17265 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco21E1C08ORF17265P |
| 17270 | cell division protein ZapA | |||
| 20650 | HNH endonuclease | |||
| 20655 | R | SflN101ORF11875P (100% identity) | Eco21E1C08ORF20655P | |
| 20660 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 24040 | 73 aa hypothetical protein | |||
| 24045 | M | M.SflN92ORF24820P (100% identity) | M.Eco21E1C08ORF24045P | |
| 24050 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20465 | endoribonuclease SymE | |||
| 20470 | R | Ecos673GmrDP (100% identity) | Eco21E1C08GmrDP | |
| 20475 | R | SflN101GmrSP (100% identity) | Eco21E1C08GmrSP | |
| 20480 | cytoplasmic protein | |||
| 20655 | HNH endonuclease | |||
| 20660 | R | SflN101McrBP (100% identity) | Eco21E1C08McrBP | |
| 20665 | R | SflN101McrCP (100% identity) | Eco21E1C08McrCP | |
| 20670 | 128 aa hypothetical protein | |||