Escherichia coli RHB08-E3-C05 |
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Putative Escherichia coli RHB08-E3-C05 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,852,089 bp | CP099267 |
| plasmid unnamed1: | 88,327 bp | CP099268 |
REBASE acronym: Eco8E3C05
Org_num: 66443
All begin NFJ51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19310 | DUF262 domain-containing HNH endonuclease family | |||
| 19315 | R | EfeEF31ORF18020P (99% identity) | CCANNNNNNNNNTTGG | Eco8E3C05ORF19320P |
| 19320 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco8E3C05ORF19320P |
| 19325 | S | S.EcoZ151ORF20685P (99% identity) | CCANNNNNNNNNTTGG | S.Eco8E3C05ORF19320P |
| 19330 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1770 | cell division protein DamX | |||
| 1775 | M | M.SspPIBDamP (99% identity) | GATC | M.Eco8E3C05DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2370 | DUF2556 family protein | |||
| 2375 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco8E3C05ORF2375P |
| 2380 | DNA-binding transcriptional regulator Fis | |||
| 8840 | phosphohydrolase | |||
| 8845 | M | M.EcoEC0001DcmP (99% identity) | CCWGG | M.Eco8E3C05DcmP |
| 8850 | V | V.EcoEC0001DcmP (100% identity) | V.Eco8E3C05DcmP | |
| 8855 | drug/metabolite exporter YedA | |||
| 19525 | HNH endonuclease | |||
| 19530 | R | Eco45S0C05ORF20030P (99% identity) | Eco8E3C05ORF19530P | |
| 19535 | helicase YjhR | |||
| 19560 | IS3 family transposase | |||
| 19565 | M | M1.Eco45S0C05ORF20065P (100% identity) | M1.Eco8E3C05ORF19565P | |
| 19570 | M | M2.Eco45S0C05ORF20065P (100% identity) | M2.Eco8E3C05ORF19565P | |
| 19575 | RM | Eco45S0C05ORF20065P (99% identity) | Eco8E3C05ORF19565P | |
| 19580 | tyrosine-type recombinase/integrase | |||
| 20745 | ParA family protein | |||
| 20755 | M | M.Eco45S0C05ORF20800P (100% identity) | GGCGCC | M.Eco8E3C05ORF20755P |
| 20760 | R | Eco45S0C05ORF20800P (100% identity) | GGCGCC | Eco8E3C05ORF20755P |
| 20765 | C | C.Eco45S0C05ORF20800P (100% identity) | C.Eco8E3C05ORF20755P | |
| 20770 | lysine decarboxylation/transport transcriptional | |||
| plasmid unnamed1 | ||||
| 23350 | 73 aa hypothetical protein | |||
| 23355 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco8E3C05ORF23355P | |
| 23360 | 103 aa hypothetical protein | |||