Escherichia coli RHB47-SO-C04 |
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Putative Escherichia coli RHB47-SO-C04 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,989,106 bp | CP098931 |
| plasmid unnamed1: | 121,203 bp | CP098932 |
REBASE acronym: Eco47SOC04
Org_num: 66547
All begin NFL63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2015 | 433 aa hypothetical protein | |||
| 2020 | S | S.EcoSTEC640ORF20915P (100% identity) | CCAYNNNNNTGT | S.Eco47SOC04ORF2025P |
| 2025 | M | M.EcohubtORF19935P (100% identity) | CCAYNNNNNTGT | M.Eco47SOC04ORF2025P |
| 2030 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2040 | AAA family ATPase | |||
| 2045 | R | SflN101ORF11875P (100% identity) | Eco47SOC04ORF2045P | |
| 2050 | HNH endonuclease | |||
| 13255 | drug/metabolite exporter YedA | |||
| 13260 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco47SOC04DcmP |
| 13265 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco47SOC04DcmP |
| 13270 | phosphohydrolase | |||
| 14865 | 75 aa hypothetical protein | |||
| 14870 | M | M.Ero389LORFCP (95% identity) | M.Eco47SOC04ORF14870P | |
| 14875 | 164 aa hypothetical protein | |||
| 14920 | 150 aa hypothetical protein | |||
| 14925 | M | M.EclE7ORF6080P (94% identity) | M.Eco47SOC04ORF14925P | |
| 14930 | 65 aa hypothetical protein | |||
| 16870 | ribosome-associated translation inhibitor RaiA | |||
| 16875 | M | M.SenYU39ORF1896P (99% identity) | M.Eco47SOC04ORF16875P | |
| 16880 | Com family DNA-binding transcriptional | |||
| 17425 | replication endonuclease | |||
| 17430 | M | M.EcoUM1887ORF6160P (100% identity) | GATC | M.Eco47SOC04ORF17430P |
| 17435 | TraR/DksA family transcriptional regulator | |||
| 19160 | 62 aa hypothetical protein | |||
| 19165 | M | M.EcoC9969I (100% identity) | CTGAAG | M.Eco47SOC04ORF19165P |
| 19170 | RM | Efe41C23ORF15565P (100% identity) | CTGAAG | Eco47SOC04ORF19165P |
| 19175 | type I restriction-modification system subunit M | |||
| 20855 | DNA-binding transcriptional regulator Fis | |||
| 20860 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco47SOC04ORF20860P |
| 20865 | DUF2556 family protein | |||
| plasmid unnamed1 | ||||
| 24725 | 103 aa hypothetical protein | |||
| 24730 | M | M.Sen1337ORF11922P (100% identity) | SAY | M.Eco47SOC04ORF24730P |
| 24735 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2030 | 128 aa hypothetical protein | |||
| 2035 | R | Ecows53McrCP (100% identity) | Eco47SOC04McrC2P | |
| 2040 | R | EcoSMBLMcrBP (100% identity) | Eco47SOC04McrB2P | |
| 2045 | HNH endonuclease | |||
| 8620 | site-specific DNA recombinase | |||
| 8625 | R | EcoSC487ORFBP (100% identity) | YCGR | Eco47SOC04ORF8625P |
| 8630 | isocitrate/isopropylmalate family dehydrogenase | |||
| 19175 | type I restriction-modification system subunit M | |||
| 19180 | R | Eco47C15McrCP (100% identity) | Eco47SOC04McrCP | |
| 19185 | R | Eco47C15McrBP (100% identity) | Eco47SOC04McrBP | |
| 19190 | zinc-ribbon domain-containing protein | |||