Escherichia coli RHB43-SO-C04 |
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Putative Escherichia coli RHB43-SO-C04 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,932,279 bp | CP099059 |
| plasmid unnamed1: | 124,283 bp | CP099060 |
| plasmid unnamed2: | 107,495 bp | CP099061 |
REBASE acronym: Eco43SOC04
Org_num: 66507
All begin NFK90_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1880 | cell division protein DamX | |||
| 1885 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco43SOC04DamP |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2505 | DUF2556 family protein | |||
| 2510 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco43SOC04ORF2510P |
| 2515 | DNA-binding transcriptional regulator Fis | |||
| 9215 | TrmB family transcriptional regulator | |||
| 9220 | M | M.EcoFu019ORF10110P (100% identity) | M.Eco43SOC04ORF9220P | |
| 9235 | phage holin family protein | |||
| 9425 | phosphohydrolase | |||
| 9430 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.Eco43SOC04DcmP |
| 9435 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco43SOC04DcmP |
| 9440 | drug/metabolite exporter YedA | |||
| 10095 | 72 aa hypothetical protein | |||
| 10100 | M | M.Eco43SOC03ORF10100P (100% identity) | M.Eco43SOC04ORF10100P | |
| 10105 | 56 aa hypothetical protein | |||
| 11615 | DUF977 family protein | |||
| 11620 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco43SOC04ORF11620P | |
| 11625 | 139 aa hypothetical protein | |||
| 13700 | tellurite/colicin resistance protein | |||
| 13715 | M | M.EcoP19ORFHP (100% identity) | M.Eco43SOC04ORF13715P | |
| 13720 | TrmB family transcriptional regulator | |||
| 16370 | NinE family protein | |||
| 16375 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco43SOC04ORF16375P |
| 16380 | recombination protein NinB | |||
| plasmid unnamed1 | ||||
| 24240 | 73 aa hypothetical protein | |||
| 24245 | M | M.Sen527ORF25750P (100% identity) | M.Eco43SOC04ORF24245P | |
| 24250 | 101 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25000 | 103 aa hypothetical protein | |||
| 25005 | M | M.StyR64ORFAP (100% identity) | M.Eco43SOC04ORF25005P | |
| 25010 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 345 | zinc-ribbon domain-containing protein | |||
| 350 | R | Kpn0718McrBP (100% identity) | Eco43SOC04McrBP | |
| 355 | R | SflN97McrCP (100% identity) | Eco43SOC04McrCP | |
| 360 | transposase | |||
| 20545 | BrnT family toxin | |||
| 20550 | R | SflSTLE3MrrP (100% identity) | Eco43SOC04MrrP | |
| 20555 | type I restriction-modification system subunit | |||