Escherichia coli RHB20-E3-C07 |
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Putative Escherichia coli RHB20-E3-C07 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,829,220 bp | CP099197 |
| plasmid unnamed1: | 101,222 bp | CP099198 |
REBASE acronym: Eco20E3C07
Org_num: 66462
All begin NFK00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11980 | 322 aa hypothetical protein | |||
| 11985 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco20E3C07ORF11990P |
| 11990 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco20E3C07ORF11990P |
| 11995 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco20E3C07ORF11990P |
| 12000 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 845 | phosphohydrolase | |||
| 850 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.Eco20E3C07DcmP |
| 855 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco20E3C07DcmP |
| 860 | drug/metabolite exporter YedA | |||
| 10170 | LexA family transcriptional regulator | |||
| 10175 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco20E3C07ORF10175P |
| 10180 | PerC family transcriptional regulator | |||
| 12185 | HNH endonuclease | |||
| 12190 | R | SflFF16ORF19630P (100% identity) | Eco20E3C07ORF12190P | |
| 12195 | IS3 family transposase | |||
| 12210 | phospholipase D family protein | |||
| 12215 | M | M.SflWW1ORF19920P (100% identity) | CCCAGA | M.Eco20E3C07ORF12215P |
| 12220 | integrase arm-type DNA-binding domain-containing | |||
| 17435 | DUF2556 family protein | |||
| 17440 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco20E3C07ORF17440P |
| 17445 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed1 | ||||
| 23750 | 73 aa hypothetical protein | |||
| 23755 | M | M.Eco1470ORF570P (100% identity) | M.Eco20E3C07ORF23755P | |
| 23760 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12000 | endoribonuclease SymE | |||
| 12005 | R | SflWW1GmrSDP (55% identity) | Eco20E3C07GmrSDBP | |
| 12010 | R | SflWW1GmrSDP (42% identity) | Eco20E3C07GmrSDAP | |
| 12015 | cytoplasmic protein | |||