Rhizobium tumorigenes 932 |
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Putative Rhizobium tumorigenes 932 RM systems
Ref: Kuzmanovic,N. et al. Microbiologyopen 12 (2) (2023)
REBASE ref # 36621
| Sequence length: | GenBank #: | |
| Chromosome: | 3,816,680 bp | CP117261 |
| plasmid pTi932: | 430,508 bp | CP117263 |
REBASE acronym: Rtu932
Org_num: 66795
All begin PR016_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10385 | 78 aa hypothetical protein | |||
| 10390 | V | V.Psy158ORF9130P (45% identity) | V.Rtu932ORF10395P | |
| 10395 | M | M.Rag703ORF22630P (68% identity) | M.Rtu932ORF10395P | |
| 10400 | ATP-binding protein | |||
| plasmid pTi932 | ||||
| 22205 | R | Rtu1078ORF21745P (100% identity) | Rtu932ORF22215P | |
| 22210 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| 22215 | M | M.Rtu1078ORF21745P (100% identity) | M.Rtu932ORF22215P | |
| 22220 | V | V.Rtu1078ORF21745P (100% identity) | V.Rtu932ORF22215P | |
| 22225 | 449 aa hypothetical protein | |||
| 24015 | DUF262 domain-containing protein | |||
| 24020 | R | Rtu1078ORF23580P (100% identity) | Rtu932ORF24025P | |
| 24025 | M | M.Rtu1078ORF23580P (100% identity) | M.Rtu932ORF24025P | |
| 24030 | DUF4365 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTi932 | ||||
| 23975 | IS5 family transposase | |||
| 23980 | R | Rtu1078GmrSDP (99% identity) | Rtu932GmrSDP | |
| 23985 | AAA family ATPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2430 | nucleotidyltransferase domain-containing | |||
| 2435 | M | M.Rtu1078ORF2570P (100% identity) | M.Rtu932ORF2435P | |
| 2440 | nuclear transport factor 2 family protein | |||