Escherichia coli rl0044 |
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Putative Escherichia coli rl0044 RM systems
Ref: Perreten,V. et al. unpublished
REBASE ref # 36549
| Sequence length: | GenBank #: | |
| Chromosome: | 5,256,017 bp | CP121356 |
| plasmid pVP440: | 99,247 bp | CP121357 |
| plasmid pVP441: | 94,075 bp | CP121358 |
| plasmid pVP443: | 93,908 bp | CP121360 |
| plasmid pVP444: | 67,031 bp | CP121361 |
| plasmid pVP445: | 78,040 bp | CP121362 |
REBASE acronym: Eco10044
Org_num: 66560
All begin P9060_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco10044DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 family protein | |||
| 2385 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco10044ORF2385P |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 6345 | TrmB family transcriptional regulator | |||
| 6350 | M | M.EcoC1744ORF6450P (99% identity) | M.Eco10044ORF6350P | |
| 6360 | 132 aa hypothetical protein | |||
| 6855 | Com family DNA-binding transcriptional | |||
| 6860 | M | M.EcoW25KORF16895P (100% identity) | M.Eco10044ORF6860P | |
| 6865 | AAA family ATPase | |||
| 7355 | serine/threonine protein phosphatase | |||
| 7360 | M | M.EcoW25KORF3575P (100% identity) | GATC | M.Eco10044ORF7360P |
| 7365 | PerC family transcriptional regulator | |||
| 10975 | phosphohydrolase | |||
| 10980 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco10044DcmP |
| 10985 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco10044DcmP |
| 10990 | drug/metabolite exporter YedA | |||
| 13000 | DUF977 family protein | |||
| 13005 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco10044ORF13005P | |
| 13010 | 139 aa hypothetical protein | |||
| 18460 | 273 aa hypothetical protein | |||
| 18465 | M | M.EcosW25KORF9360P (100% identity) | GATC | M.Eco10044ORF18465P |
| 18470 | TraR/DksA family transcriptional regulator | |||
| plasmid pVP440 | ||||
| 26425 | 103 aa hypothetical protein | |||
| 26430 | M | M.SflFF87ORF23240P (100% identity) | M.Eco10044ORF26430P | |
| 26435 | 73 aa hypothetical protein | |||
| plasmid pVP441 | ||||
| 26895 | glutamine--tRNA ligase | |||
| ??? | M | M.SenThORF23620P (100% identity) | M.Eco10044ORF26900P | |
| 26905 | 216 aa hypothetical protein | |||
| plasmid pVP443 | ||||
| 28480 | 73 aa hypothetical protein | |||
| 28485 | M | M.EcosW25KORF25595P (100% identity) | M.Eco10044ORF28485P | |
| 28490 | group II intron reverse transcriptase/maturase | |||
| plasmid pVP444 | ||||
| 28850 | 73 aa hypothetical protein | |||
| 28855 | M | M.EcosW25KORF26210P (100% identity) | M.Eco10044ORF28855P | |
| 28860 | 103 aa hypothetical protein | |||
| plasmid pVP445 | ||||
| 29055 | 97 aa hypothetical protein | |||
| 29060 | M | M.EcoPK8217ORF24325P (100% identity) | M.Eco10044ORF29060P | |
| 29065 | 73 aa hypothetical protein | |||