Thiomicrospira species R3 |
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Putative Thiomicrospira species R3 RM systems
Ref: Rowe,A. unpublished
REBASE ref # 36461
Complete sequence: 2,186,145 bp
GenBank #: CP121121
REBASE acronym: TspR3
Org_num: 66978
All begin P8S54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4490 | IS30 family transposase | |||
| 4495 | M | M.Vvu93ORF29970P (8% identity) | M.TspR3ORF4495P | |
| 4500 | S | S2.CseWSA1ORFDP (86% identity) | S.TspR3ORF4495P | |
| 4505 | RhuM family protein | |||
| 4510 | R | TmiBDL05ORF11540P (83% identity) | TspR3ORF4495P | |
| 4515 | 142 aa hypothetical protein | |||
| 10390 | DUF3820 family protein | |||
| 10395 | R | Pla190ORF23115P (90% identity) | TspR3ORF10420P | |
| 10400 | virulence RhuM family protein | |||
| 10405 | AAA family ATPase | |||
| 10410 | S | S.Aju2101ORFAP (78% identity) | S2.TspR3ORF10420P | |
| 10415 | S | S2.NurNm15ORF2051P (60% identity) | S1.TspR3ORF10420P | |
| 10420 | M | M.Psp41ORF1428P (87% identity) | M.TspR3ORF10420P | |
| 10425 | 55 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2010 | efflux RND transporter periplasmic adaptor | |||
| 2015 | R | HthJR2ORF2465P (79% identity) | TspR3ORF2045P | |
| 2020 | DUF262 domain-containing HNH endonuclease family | |||
| 2025 | 135 aa hypothetical protein | |||
| 2030 | 73 aa hypothetical protein | |||
| 2035 | DUF2442 domain-containing protein | |||
| 2040 | 176 aa hypothetical protein | |||
| 2045 | M | M.Dph13687ORF4180P (36% identity) | M.TspR3ORF2045P | |
| 2050 | Fic family protein | |||
| 4130 | IS30 family transposase | |||
| 4135 | R | PkoP19E3ORF3790P (91% identity) | TspR3ORF4140P | |
| 4140 | M | M.Rpl3045ORF30095P (17% identity) | M1.TspR3ORF4140BP | |
| 4145 | IS3 family transposase | |||
| 4150 | M | M.Vfl560ORFBP (50% identity) | M1.TspR3ORF4140AP | |
| 4155 | HNH endonuclease | |||
| 4160 | M | M.Sde18526ORF12680P (63% identity) | M2.TspR3ORF4140P | |
| 4165 | DUF4391 domain-containing protein | |||