Tepidibacter species SWIR-1 |
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Putative Tepidibacter species SWIR-1 RM systems
Ref: Li,X. unpublished
REBASE ref # 22399
| Sequence length: | GenBank #: | |
| Chromosome: | 4,122,966 bp | CP120733 |
| plasmid unnamed1: | 38,843 bp | CP120734 |
REBASE acronym: TspSWIR1
Org_num: 66972
All begin P4S50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2015 | helix-turn-helix domain-containing protein | |||
| 2020 | R | HorHORF20220P (82% identity) | TspSWIR1ORF2025P | |
| ??? | M | M.HorHORF20220P (77% identity) | M.TspSWIR1ORF2025P | |
| 2035 | S | S1.Lhe2020ORF3610P (28% identity) | S.TspSWIR1ORF2025P | |
| 2040 | IS3 family transposase | |||
| 15235 | PC4/YdbC family ssDNA-binding protein | |||
| 15240 | S | S.Psp20480ORF3517P (32% identity) | S.TspSWIR1ORFAP | |
| ??? | M | M.Pps311T8ORF23000P (7% identity) | M.TspSWIR1ORFABP | |
| 15245 | IS3 family transposase | |||
| 15250 | M | M.Ptr551ORF3725P (68% identity) | M.TspSWIR1ORFAAP | |
| 15255 | serine/threonine transporter SstT | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9140 | DNA N-6-adenine-methyltransferase | |||
| 9145 | M | M2.UviJGIORFX1P (83% identity) | M.TspSWIR1ORF9145P | |
| 9150 | phage/plasmid primase, P4 family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8895 | HIT family protein | |||
| 8900 | R | CbaC110ORF9150P (56% identity) | TspSWIR1ORF8900P | |
| 8905 | nucleoside triphosphate pyrophosphohydrolase | |||
| 15260 | endospore germination permease | |||
| 15265 | R | Cle5427ORF238P (66% identity) | TspSWIR1ORF15265P | |
| 15270 | (deoxy)nucleoside triphosphate | |||
| plasmid unnamed1 | ||||
| 20070 | potassium channel family protein | |||
| 20075 | R | Osp1255ORF8925P (51% identity) | TspSWIR1ORF20075P | |
| 20080 | AAA family ATPase | |||