Escherichia coli SME98 |
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Putative Escherichia coli SME98 RM systems
Ref: Sato,T. et al. unpublished
REBASE ref # 36396
| Sequence length: | GenBank #: | |
| Chromosome: | 4,956,700 bp | AP027446 |
| plasmid pSME98_1: | 72,615 bp | AP027447 |
REBASE acronym: EcoSME98
Org_num: 65805
All begin MUTS15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9160 | endoribonuclease SymE | |||
| ??? | R | Ecou021ORF19870P (100% identity) | EcoSME98ORF9230P | |
| 9200 | S | S2.Ecos119ORF20545P (100% identity) | S2.EcoSME98ORF9230P | |
| 9210 | S | S1.EcoSME173ORF19400P (96% identity) | S1.EcoSME98ORF9230P | |
| 9220 | 50 aa hypothetical protein | |||
| ??? | M | M.EcoSME173ORF19400P (92% identity) | M.EcoSME98ORF9230P | |
| 9270 | 114 aa hypothetical protein | |||
| 14820 | 156 aa hypothetical protein | |||
| 14830 | S | S.EcoBone8ORF19520P (57% identity) | S3.EcoSME98ORF14850P | |
| ??? | S | S1.EcoE300ORF77240P (49% identity) | S2.EcoSME98ORF14850P | |
| 14840 | S | S.EcoBone8ORF19520P (24% identity) | S1.EcoSME98ORF14850P | |
| 14850 | M | M.EcosS9ORF4930P (100% identity) | M.EcoSME98ORF14850P | |
| ??? | R | EcosS9ORF4930P (99% identity) | EcoSME98ORF14850P | |
| 14910 | 203 aa hypothetical protein | |||
| plasmid pSME98_1 | ||||
| 75320 | transposase | |||
| ??? | R | EcoSME173ORF530P (82% identity) | EcoSME98ORF75420P | |
| 75390 | S | S3.EcoSME173ORF530P (100% identity) | S3.EcoSME98ORF75420P | |
| 75400 | S | S2.EcoSME173ORF530P (83% identity) | S2.EcoSME98ORF75420P | |
| 75410 | S | S.SenBR076ORFFP (39% identity) | S1.EcoSME98ORF75420P | |
| ??? | M | M.EcoEC1390ORF23340P (97% identity) | M.EcoSME98ORF75420P | |
| 75450 | 86 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8070 | 60 aa hypothetical protein | |||
| ??? | M | M.EcoSME173ORF18290P (98% identity) | M.EcoSME98ORF8080P | |
| ??? | R | Eco2ORF16860P (90% identity) | EcoSME98ORF8080P | |
| 8150 | 298 aa hypothetical protein | |||
| 25110 | 71 aa hypothetical protein | |||
| 25120 | M | M.KpnYN1ORFGP (90% identity) | M.EcoSME98ORF25120P | |
| 25130 | 67 aa hypothetical protein | |||
| 31450 | 65 aa hypothetical protein | |||
| 31460 | M | M.EcoSME173ORF41660P (100% identity) | M.EcoSME98ORF31460P | |
| 31470 | 199 aa hypothetical protein | |||
| 42280 | 203 aa hypothetical protein | |||
| 42290 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoSME98DcmP |
| ??? | M | M.EcoSME173DcmP (99% identity) | CCWGG | M.EcoSME98DcmP |
| 42330 | 85 aa hypothetical protein | |||
| 65280 | DNA-binding protein Fis | |||
| ??? | M | M.EcoSME173ORF74890P (98% identity) | ATGCAT | M.EcoSME98ORF65290P |
| 65310 | 88 aa hypothetical protein | |||
| plasmid pSME98_1 | ||||
| 75150 | 73 aa hypothetical protein | |||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoSME98ORF75160P |
| 75180 | 122 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8140 | 401 aa hypothetical protein | |||
| 8150 | R | EcosEC4McrCP (68% identity) | EcoSME98McrCP | |
| 8160 | R | EcoSC457McrBP (84% identity) | EcoSME98McrBP | |
| 8170 | 84 aa hypothetical protein | |||