Thauera species GDN1 |
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Putative Thauera species GDN1 RM systems
Ref: Hsiao,T.H. et al. Gut Microbes 15 (1), 2183685 (2023)
REBASE ref # 36427
Complete sequence: 3,870,385 bp
GenBank #: CP097870
REBASE acronym: TspGDN1
Org_num: 65956
All begin CKCBHOJB_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2304 | DNA repair helicase RadD | |||
| 2305 | M | M.AcoA42I (80% identity) | M.TspGDN1ORF2305P | |
| 2306 | S | S.CpiND17ORF1615P (70% identity) | S.TspGDN1ORF2305P | |
| 2307 | 419 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 391 | 4-hydroxyphenylalkanoate adenylyltransferase | |||
| 392 | M | M.TspPiv1ORF1125P (86% identity) | M.TspGDN1ORF392P | |
| 393 | 660 aa hypothetical protein | |||
| 1523 | 592 aa hypothetical protein | |||
| ??? | V | V.LthCSK2ORF31200P (71% identity) | V.TspGDN1ORF1524P | |
| 1524 | M | M.LthCSK2ORF31200P (72% identity) | M.TspGDN1ORF1524P | |
| 1525 | 71 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 259 | 577 aa hypothetical protein | |||
| 260 | R | Pae07ORF23950P (96% identity) | TspGDN1ORF261P | |
| 261 | M | M.PaeWC55ORF19140P (97% identity) | M.TspGDN1ORF261P | |
| 262 | 596 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1168 | Alanine--tRNA ligase | |||
| 1169 | R | SdeB26MrrP (66% identity) | TspGDN1MrrP | |
| 1170 | Peptidyl-prolyl cis-trans isomerase Mip | |||