Thauera species PIV-1 Piv1 |
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Putative Thauera species PIV-1 Piv1 RM systems
Ref: William,W. unpublished
REBASE ref # 29492
| Sequence length: | GenBank #: | |
| chromosome C4PIVTH: | 4,498,018 bp | OW011623 |
| plasmid C4PIVTHp: | 39,874 bp | OW011624 |
REBASE acronym: TspPiv1
Org_num: 65667
All begin C4PIVTH_, C4PIVTH_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome C4PIVTH | ||||
| 645 | H repeat-associated putative transposase YdcC | |||
| 646 | R | TspMZORF4P (97% identity) | TspPiv1ORF650P | |
| ??? | S | S1.MspBLZ2ORFAP (14% identity) | S2.TspPiv1ORF650P | |
| 649 | S | S1.MspBLZ2ORFAP (32% identity) | S1.TspPiv1ORF650P | |
| 650 | M | M.Gin17901ORFBP (87% identity) | M.TspPiv1ORF650P | |
| 651 | protein of unknown function | |||
| 827 | Protein VdlD | |||
| 828 | S | S.ParSA190ORFAP (41% identity) | S.TspPiv1ORF829P | |
| 829 | M | M.ThuSgZ1ORF17060P (97% identity) | M.TspPiv1ORF829P | |
| 830 | Filamentation induced by cAMP protein Fic | |||
| 831 | R | ThuSgZ1ORF17060P (99% identity) | TspPiv1ORF829P | |
| 832 | L-serine deaminase III | |||
| 1015 | sulfate/thiosulfate ABC transporter periplasmic | |||
| 1016 | R | Tsp63ORFDP (100% identity) | TspPiv1ORF1019P | |
| 1017 | transcriptional regulator with HTH | |||
| 1018 | S | S.Tsp63ORFDP (75% identity) | S.TspPiv1ORF1019P | |
| 1019 | M | M.Tsp63ORFDP (93% identity) | M.TspPiv1ORF1019P | |
| 1020 | conserved membrane protein of unknown function | |||
| 2190 | predicted metal-dependent hydrolase | |||
| 2191 | R | Aal14366ORFNP (86% identity) | TspPiv1ORF2196P | |
| 2192 | AAA family ATPase | |||
| 2193 | S | S2.Sma141ORF5360P (26% identity) | S2.TspPiv1ORF2196P | |
| 2195 | S | S.Psp8BORF1062P (56% identity) | S1.TspPiv1ORF2196P | |
| 2196 | M | M.ReuHORF4P (85% identity) | M.TspPiv1ORF2196P | |
| 2197 | conserved protein of unknown function | |||
| 2655 | DNA-binding protein | |||
| ??? | R | Tte58ORF19055P (93% identity) | TspPiv1ORF2660P | |
| ??? | S | S.Tte58ORF19055P (57% identity) | S.TspPiv1ORF2660P | |
| 2659 | DNA damage-inducible protein D | |||
| 2660 | M | M.Tte58ORF19055P (96% identity) | M.TspPiv1ORF2660P | |
| 2661 | conserved protein of unknown function | |||
| 3145 | HTH cro/C1-type domain-containing protein | |||
| 3146 | M | M.Tte58ORF12900P (96% identity) | M.TspPiv1ORF3146P | |
| 3147 | S | S.DdeG6ORF3090P (70% identity) | S.TspPiv1ORF3146P | |
| 3148 | conserved protein of unknown function | |||
| 3149 | R | Tte58ORF6300P (92% identity) | TspPiv1ORF3146P | |
| 3150 | protein of unknown function | |||
| 4259 | conserved protein of unknown function | |||
| 4260 | M | M.Pba6083ORF5045P (83% identity) | M.TspPiv1ORF4260P | |
| 4261 | S | S.MshD49ORF12440P (75% identity) | S1.TspPiv1ORF4260P | |
| 4262 | Anticodon nuclease | |||
| 4263 | S | S1.AavQHB1ORF1045P (89% identity) | S2.TspPiv1ORF4260P | |
| 4264 | R | Pla190ORF23115P (89% identity) | TspPiv1ORF4260P | |
| 4265 | 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA | |||
| 4300 | protein of unknown function | |||
| 4301 | M | M1.TspSWB20ORF823P (97% identity) | M1.TspPiv1ORF4301P | |
| 4302 | M | M2.TspSWB20ORF823P (97% identity) | M2.TspPiv1ORF4301P | |
| 4303 | ATP-dependent DNA helicase RecG-related | |||
| 4304 | S | S.CspZM22ORF7890P (38% identity) | S.TspPiv1ORF4301P | |
| 4305 | H repeat-associated putative transposase YdcC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome C4PIVTH | ||||
| 1124 | cyclic di-GMP phosphodiesterase | |||
| 1125 | M | M.TspWB2ORF18265P (85% identity) | M.TspPiv1ORF1125P | |
| 1126 | protein of unknown function | |||
| 1661 | protein of unknown function | |||
| 1662 | M | M.TspPiv1ORF1680P (37% identity) | M.TspPiv1ORF1662P | |
| 1664 | Phage integrase family protein | |||
| 2331 | conserved protein of unknown function | |||
| 2332 | RM | Tte58ORF3090P (78% identity) | TspPiv1ORF2332P | |
| 2333 | conserved protein of unknown function | |||
| 3072 | HKD family nuclease | |||
| 3073 | RM | Tsp28ORFCP (70% identity) | TspPiv1ORF3073P | |
| 3074 | Chaperone protein DnaK | |||
| plasmid C4PIVTHp | ||||
| 9 | Cobyrinic acid ac-diamide synthase | |||
| ??? | R | BdoPC543ORFBP (44% identity) | TspPiv1ORF10P | |
| ??? | V | V.TspMZORF2371P (43% identity) | V.TspPiv1ORF10P | |
| 10 | M | M.TspMZORF2371P (91% identity) | M.TspPiv1ORF10P | |
| 11 | Resolvase domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome C4PIVTH | ||||
| 2127 | RND family efflux transporter MFP subunit | |||
| 2128 | R | Tsp63MrrP (100% identity) | TspPiv1MrrP | |
| 2130 | glutamine--tRNA ligase | |||
| 2187 | Helix-turn-helix domain-containing protein | |||
| 2188 | R | Msp14BMcrCP (67% identity) | TspPiv1McrCP | |
| 2189 | R | Pxa955McrBP (80% identity) | TspPiv1McrBP | |
| 2190 | predicted metal-dependent hydrolase | |||