Klebsiella pneumoniae VSI78 |
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Putative Klebsiella pneumoniae VSI78 RM systems
Ref: Whidbey,C. unpublished
REBASE ref # 36309
| Sequence length: | GenBank #: | |
| Chromosome: | 5,213,267 bp | CP118038 |
| plasmid pKpVSI78_2: | 134,868 bp | CP118040 |
REBASE acronym: KpnVSI78
Org_num: 65469
All begin PUW63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22495 | IS3 family transposase | |||
| 22500 | R | KpnsC2ORF22785P (99% identity) | KpnVSI78ORF22505P | |
| 22505 | M | M.Csp021ORF21070P (99% identity) | M.KpnVSI78ORF22505P | |
| 22510 | S | S.Pco342ORF12160P (66% identity) | S1.KpnVSI78ORF22505P | |
| 22515 | S | S.Pco342ORF12160P (28% identity) | S2.KpnVSI78ORF22505P | |
| 22520 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1790 | cell division protein DamX | |||
| 1795 | M | M.KspC31DamP (100% identity) | GATC | M.KpnVSI78DamP |
| 1800 | ribulose-phosphate 3-epimerase | |||
| 8465 | phosphohydrolase | |||
| 8470 | M | M.KpnshvKP1DcmP (100% identity) | CCWGG | M.KpnVSI78DcmP |
| 8475 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnVSI78DcmP |
| 8480 | drug/metabolite exporter YedA | |||
| 14590 | YqaJ viral recombinase family protein | |||
| 14595 | M | M.Kpnu28ORF20920P (100% identity) | GATC | M.KpnVSI78ORF14595P |
| 14600 | 73 aa hypothetical protein | |||
| 15395 | replication endonuclease | |||
| 15400 | M | M.Kpn5890ORF17400P (100% identity) | M.KpnVSI78ORF15400P | |
| 15405 | 3-5 exoribonuclease | |||
| 22275 | HNH endonuclease | |||
| 22280 | R | Ksp4251ORF21915P (100% identity) | KpnVSI78ORF22280P | |
| 22285 | type VI secretion system tube protein Hcp | |||
| plasmid pKpVSI78_2 | ||||
| 26200 | 56 aa hypothetical protein | |||
| 26205 | M | M.KvaJS7ORF28345P (100% identity) | M.KpnVSI78ORF26205P | |
| 26210 | 73 aa hypothetical protein | |||