Escherichia coli NB4833 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NB4833 RM systems
Ref: Weng,X. unpublished
REBASE ref # 23283
| Sequence length: | GenBank #: | |
| Chromosome: | 4,898,971 bp | CP118601 |
| plasmid pNB4833-1: | 261,710 bp | CP118602 |
REBASE acronym: Eco4833
Org_num: 65257
All begin OU688_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4355 | transposase | |||
| 4360 | R | EcoCS18FORF2130P (100% identity) | CTANNNNNNCTTC | Eco4833ORF4365P |
| 4365 | M | M.EcosEC2ORF410P (100% identity) | CTANNNNNNCTTC | M.Eco4833ORF4365P |
| 4370 | S | S.EcosC41ORF22705P (100% identity) | CTANNNNNNCTTC | S.Eco4833ORF4365P |
| 4375 | AAA family ATPase | |||
| 9810 | IS5 family transposase | |||
| 9815 | M | M.Kpn99ORF25615P (100% identity) | M.Eco4833ORF9815P | |
| 9820 | S | S.EcoJS426ORF1170P (100% identity) | S.Eco4833ORF9815P | |
| 9825 | YecA family protein | |||
| 9830 | R | EcoZ063ORF9555P (100% identity) | Eco4833ORF9815P | |
| 9835 | SprT family zinc-dependent metalloprotease | |||
| 20335 | 128 aa hypothetical protein | |||
| 20340 | M | M.EcohubtORF19935P (100% identity) | CCAYNNNNNTGT | M.Eco4833ORF20340P |
| 20345 | S | S.EcoSTEC640ORF20915P (100% identity) | CCAYNNNNNTGT | S.Eco4833ORF20340P |
| 20350 | 433 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4833DamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4833ORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 9540 | phosphohydrolase | |||
| 9545 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco4833DcmP |
| 9550 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco4833DcmP |
| 9555 | drug/metabolite exporter YedA | |||
| 20315 | HNH endonuclease | |||
| 20320 | R | SflN101ORF11875P (99% identity) | Eco4833ORF20320P | |
| 20325 | AAA family ATPase | |||
| plasmid pNB4833-1 | ||||
| 24620 | 48 aa hypothetical protein | |||
| 24625 | M | M.YpsF1ORFBP (100% identity) | M.Eco4833ORF24625P | |
| 24630 | 202 aa hypothetical protein | |||
| 24765 | DNA-binding protein | |||
| 24770 | M | M.YpsF1ORFDP (95% identity) | M.Eco4833ORF24770P | |
| 24775 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20320 | HNH endonuclease | |||
| 20325 | R | EcoSMBLMcrBP (100% identity) | Eco4833McrBP | |
| 20330 | R | Ecows53McrCP (100% identity) | Eco4833McrCP | |
| 20335 | 128 aa hypothetical protein | |||