Vibrio harveyi fish10 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio harveyi fish10 RM systems
Ref: Zupicic,I.G. et al. unpublished
REBASE ref # 36341
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,798,733 bp | CP118596 |
| chromosome 2: | 2,275,091 bp | CP118597 |
REBASE acronym: Vhaf10
Org_num: 65550
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | VcaLB102ORF20660P (97% identity) | Vhaf10ORFFP | |
| ??? | S | S.Cpo15ORFCP (47% identity) | S.Vhaf10ORFFP | |
| ??? | M | M.VspB183ORF2435P (95% identity) | M.Vhaf10ORFFP | |
| chromosome 2 | ||||
| ??? | S | S.Vvu2444ORFGP (59% identity) | S.Vhaf10ORFGP | |
| ??? | M | M.Vsp43009ORF10120P (91% identity) | M.Vhaf10ORFGP | |
| ??? | R | Vsp43186ORF8160P (97% identity) | Vhaf10ORFGP | |
| ??? | M | M.VhaBBORF6810P (95% identity) | M.Vhaf10ORFCP | |
| ??? | S | S.ValFA2ORF50P (58% identity) | S.Vhaf10ORFCP | |
| ??? | R | Vha2a10ORF17720P (98% identity) | Vhaf10ORFCP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | Vhaf5ORFGP (98% identity) | GGCC | Vhaf10ORFHP |
| ??? | M | M.Vhafi2ORFAP (100% identity) | GGCC | M.Vhaf10ORFEP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | Vpa1392ORFBP (96% identity) | Vhaf10ORFDP | |
| ??? | M | M.Vpa1392ORFBP (96% identity) | M.Vhaf10ORFDP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | VhaNHLM1MrrP (98% identity) | Vhaf10MrrP | |
| chromosome 2 | ||||
| ??? | R | VspHMcrCP (92% identity) | Vhaf10McrCP | |
| ??? | R | Vco27227McrBP (56% identity) | Vhaf10McrBP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.Vsp43155DamP (99% identity) | GATC | M.Vhaf10ORFBP |