|
Putative Salmonella enterica subsp. enterica serovar Typhimurium RM096 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,863,964 bp
GenBank #: CP117357
REBASE acronym: SenRM096
Org_num: 65390
All begin PQQ15_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20205 | restriction endonuclease | |||
20210 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenRM096ORF20215P |
20215 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenRM096ORF20215P |
20220 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenRM096ORF20215P |
20225 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1810 | cell division protein DamX | |||
1815 | M | M.StyTDamP (100% identity) | GATC | M.SenRM096DamP |
1820 | ribulose-phosphate 3-epimerase | |||
2305 | DUF2556 family protein | |||
2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM096ORF2310P |
2315 | DNA-binding transcriptional regulator Fis | |||
9575 | PerC family transcriptional regulator | |||
9580 | M | M.StyUK1V (100% identity) | GATC | M.SenRM096ORF9580P |
9585 | RusA family crossover junction | |||
9815 | phosphohydrolase | |||
9820 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenRM096DcmP |
9825 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM096DcmP |
9830 | drug/metabolite exporter YedA | |||
20365 | BREX system P-loop protein BrxC | |||
20370 | RM | SenRM085ORF20040P (100% identity) | GATCAG | SenRM096ORF20370P |
20375 | AAA family ATPase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
18015 | small effector SsaA | |||
18020 | R | StyUK1IP (99% identity) | CAGAG | SenRM096ORF18025P |
18025 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM096ORF18025P |
18030 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
20200 | BrnT family toxin | |||
20205 | R | StyUK1MrrP (100% identity) | SenRM096MrrP | |
20210 | type I restriction-modification system | |||
20390 | protease Lon-related BREX system protein BrxL | |||
20395 | R | StyLTMrrP (100% identity) | SenRM096Mrr2P | |
20400 | AAA domain-containing protein |