Corynebacterium efficiens YS-314 |
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Putative Corynebacterium efficiens YS-314 RM systems
Ref: Nishio,Y. et al. Genome Res. 13 (7), 1572-1579 (2003)
REBASE ref # 7749
| Sequence length: | GenBank #: | |
| Chromosome: | 3,147,090 bp | BA000035 (NC_004369) |
| plasmid pCE2: | 23,743 bp | AP005225 (NC_004319) |
| plasmid pCE3: | 48,672 bp | AP005226 (NC_004320) |
REBASE acronym: Cef
Org_num: 213
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | 604 aa hypothetical protein | |||
| ??? | M | M.Cma45190ORF3910P (90% identity) | M.CefORF48P | |
| ??? | S | S.ApoII (30% identity) | S.CefORF48P | |
| ??? | R | CglG2ORF4845P (90% identity) | CefORF48P | |
| ??? | transposase | |||
| ??? | transposase | |||
| ??? | M | M.Abe43387ORFAP (95% identity) | M.CefORF257P | |
| ??? | S | S.SbfII (42% identity) | S.CefORF257P | |
| ??? | R | Abe43387ORFAP (90% identity) | CefORF257P | |
| ??? | 234 aa conserved hypothetical protein | |||
| ??? | type I restriction-modification system | |||
| ??? | M | M.Cgu6ORF3580P (88% identity) | M.CefORF2327P | |
| ??? | S | S1.MspSMC8ORF19125P (63% identity) | S.CefORF2327P | |
| ??? | R | Cgu6ORF3580P (92% identity) | CefORF2327P | |
| ??? | 414 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | TnpC protein | |||
| ??? | M | M.Mcu11656I (60% identity) | CCANNNNNTGG | M.CefORF1493P |
| ??? | R | Mcu11656IP (58% identity) | CCANNNNNTGG | CefORF1493P |
| ??? | 53 aa hypothetical protein | |||
| ??? | 511 aa conserved hypothetical protein | |||
| ??? | RM | Cfa45971ORF13455P (67% identity) | CefORF2898P | |
| ??? | 205 aa hypothetical protein | |||
| plasmid pCE2 | ||||
| ??? | 485 aa conserved hypothetical protein | |||
| ??? | RM | Csp453ORF15480P (37% identity) | CefORF14P | |
| ??? | transposase | |||
| ??? | transposase | |||
| ??? | RM | CteY11ORF685P (34% identity) | CefORF1P | |
| ??? | conjugal transfer protein traA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | 208 aa hypothetical protein | |||
| ??? | R | 351 aa hypothetical protein | CefMrrP | |
| ??? | pantoate--beta-alanine ligase | |||
| plasmid pCE3 | ||||
| ??? | 547 aa conserved hypothetical protein | |||
| ??? | R | Cfa45971MrrP (86% identity) | CefMrr2P | |
| ??? | conjugal transfer protein traA | |||