Xanthomonas campestris pv. campestris 33-5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas campestris pv. campestris 33-5 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,024,665 bp
GenBank #: CP066994
REBASE acronym: Xca335
Org_num: 65595
All begin JH276_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6040 | M48 family metallopeptidase | |||
| 6045 | R | Xca662ORF15730P (100% identity) | Xca335ORF6065P | |
| 6050 | S | S.XcaCN18ORFCP (100% identity) | S.Xca335ORF6065P | |
| 6055 | virulence RhuM family protein | |||
| 6060 | damage-inducible protein D | |||
| 6065 | M | M.Xca334ORF15760P (100% identity) | M.Xca335ORF6065P | |
| 6070 | restriction endonuclease subunit S | |||
| 15315 | M48 family metallopeptidase | |||
| 15320 | R | Xca662ORF6435P (100% identity) | Xca335ORF15335P | |
| 15325 | S | S2.Xca662ORF6435P (100% identity) | S2.Xca335ORF15335P | |
| 15330 | S | S1.Xca662ORF6435P (100% identity) | S1.Xca335ORF15335P | |
| 15335 | M | M.Xca662ORF6435P (100% identity) | M.Xca335ORF15335P | |
| 15340 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2585 | integrase arm-type DNA-binding domain-containing | |||
| 2590 | RM | Xca662ORF19190P (100% identity) | Xca335ORF2590P | |
| 2595 | AAA family ATPase | |||
| 2935 | IS3-like element IS1404 family transposase | |||
| 2940 | R | XcaYORFAP (98% identity) | Xca335ORF2940P | |
| 2945 | 90 aa hypothetical protein | |||
| 5135 | 860 aa hypothetical protein | |||
| 5140 | M | M.Xca662ORF16645P (100% identity) | M.Xca335ORF5140P | |
| 5145 | AIPR family protein | |||
| 5170 | ATP-binding protein | |||
| 5175 | V | V.Xca8284ORF5270P (100% identity) | V.Xca335ORF5175P | |
| 5180 | HNH endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18765 | dienelactone hydrolase family protein | |||
| 18770 | R | Xca662ORF2985P (100% identity) | Xca335ORF18775P | |
| 18775 | M | M.Xca662ORF2985P (100% identity) | M.Xca335ORF18775P | |
| 18780 | DNA binding domain-containing protein | |||