Xanthomonas campestris pv. campestris 42-3 |
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Putative Xanthomonas campestris pv. campestris 42-3 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,020,217 bp
GenBank #: CP066993
REBASE acronym: Xca423
Org_num: 65600
All begin JH268_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6480 | Mrr restriction system protein | |||
| 6485 | M | M.Xca662ORF6435P (100% identity) | M.Xca423ORF6485P | |
| 6490 | S | S1.Xca662ORF6435P (100% identity) | S1.Xca423ORF6485P | |
| 6495 | S | S2.Xca662ORF6435P (100% identity) | S2.Xca423ORF6485P | |
| 6500 | R | Xca662ORF6435P (100% identity) | Xca423ORF6485P | |
| 6505 | M48 family metallopeptidase | |||
| 15730 | restriction endonuclease subunit S | |||
| 15735 | M | M.Xcacc2ORF6130P (100% identity) | M.Xca423ORF15735P | |
| 15740 | damage-inducible protein D | |||
| 15745 | virulence RhuM family protein | |||
| 15750 | S | S.XcaCN18ORFCP (100% identity) | S.Xca423ORF15735P | |
| 15755 | R | Xca662ORF15730P (100% identity) | Xca423ORF15735P | |
| 15760 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16615 | HNH endonuclease | |||
| 16620 | V | V.Xca8284ORF5270P (100% identity) | V.Xca423ORF16645P | |
| 16625 | ATP-binding protein | |||
| 16630 | Z1 domain-containing protein | |||
| 16635 | PD-(D/E)XK motif protein | |||
| 16640 | AIPR family protein | |||
| 16645 | M | M.Xca662ORF16645P (100% identity) | M.Xca423ORF16645P | |
| 16650 | 860 aa hypothetical protein | |||
| 18840 | 90 aa hypothetical protein | |||
| 18845 | R | XcaYORFAP (98% identity) | Xca423ORF18845P | |
| 18850 | IS3-like element IS1404 family transposase | |||
| 19180 | AAA family ATPase | |||
| 19185 | RM | Xca662ORF19190P (100% identity) | Xca423ORF19185P | |
| 19190 | integrase arm-type DNA-binding domain-containing | |||
| 19225 | AHH domain-containing protein | |||
| 19230 | M | M.Xca983ORF19460P (100% identity) | M.Xca423ORF19230P | |
| 19235 | R | R1.Xca983ORF19460P (100% identity) | R1.Xca423ORF19230P | |
| 19240 | R | R2.Xca662ORF19235P (100% identity) | R2.Xca423ORF19230P | |
| 19245 | 273 aa hypothetical protein | |||