Salmonella enterica subsp. enterica serovar Typhi S4 |
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Putative Salmonella enterica subsp. enterica serovar Typhi S4 RM systems
Ref: Ho,P.-L. et al. unpublished
REBASE ref # 36285
Complete sequence: 4,776,296 bp
GenBank #: CP117292
REBASE acronym: SenTS4
Org_num: 65382
All begin PRW96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20120 | restriction endonuclease | |||
| 20125 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenTS4ORF20130P |
| 20130 | M | M.StyTORF4575P (99% identity) | GAANNNNNNNNTCGC | M.SenTS4ORF20130P |
| 20135 | S | S.Senst12ORF9800P (100% identity) | GAANNNNNNNNTCGC | S.SenTS4ORF20130P |
| 20140 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | cell division protein DamX | |||
| 1730 | M | M.StyTDamP (100% identity) | GATC | M.SenTS4DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 3110 | DUF2556 family protein | |||
| 3115 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenTS4ORF3115P |
| 3120 | DNA-binding transcriptional regulator Fis | |||
| 9665 | phosphohydrolase | |||
| 9670 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenTS4DcmP |
| 9675 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenTS4DcmP |
| 9680 | drug/metabolite exporter YedA | |||
| 15075 | DGQHR domain-containing protein | |||
| 15080 | M | M.StyTORF1926P (95% identity) | M.SenTS4ORF15080P | |
| 15085 | DUF4060 family protein | |||
| 20255 | YebC/PmpR family DNA-binding transcriptional | |||
| 20260 | R | Senst12ORF9665P (100% identity) | SenTS4ORF20260P | |
| 20265 | 64 aa hypothetical protein | |||
| 21335 | 3-5 exonuclease | |||
| 21340 | M | M.StyTORF4329P (100% identity) | GATC | M.SenTS4ORF21340P |
| 21345 | replication endonuclease | |||
| 23005 | TraR/DksA family transcriptional regulator | |||
| 23010 | M | M.StyTORF3409P (100% identity) | GATC | M.SenTS4ORF23010P |
| 23015 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18000 | small effector SsaA | |||
| 18005 | R | StyTORF2507P (99% identity) | CAGAG | SenTS4ORF18010P |
| 18010 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenTS4ORF18010P |
| 18015 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20115 | BrnT family toxin | |||
| 20120 | R | SenTS6MrrP (100% identity) | SenTS4MrrP | |
| 20125 | type I restriction-modification system | |||