Helicobacter winghamensis ATCC BAA-430 |
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Putative Helicobacter winghamensis ATCC BAA-430 RM systems
Ref: Majcher,M. et al. unpublished
REBASE ref # 36248
Complete sequence: 1,663,654 bp
GenBank #: CP063533
REBASE acronym: Hwi430
Org_num: 8398
All begin IP358_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2190 | 179 aa hypothetical protein | |||
| 2195 | M | M.Hwi7711ORF2180P (96% identity) | M.Hwi430ORFBP | |
| 2200 | S | S1.Cup6824ORF6445P (96% identity) | S2.Hwi430ORFBP | |
| 2205 | S | S2.Hwi7711ORF2180P (100% identity) | S1.Hwi430ORFBP | |
| 2210 | 259 aa hypothetical protein | |||
| 6755 | aminoacetone oxidase family FAD-binding enzyme | |||
| 6760 | S | S2.Hwi488ORF7215P (100% identity) | S2.Hwi430ORF6795P | |
| 6765 | Holliday junction branch migration DNA helicase | |||
| 6770 | 3-methyl-2-oxobutanoate | |||
| 6775 | 123 aa hypothetical protein | |||
| 6780 | R | Hwi430ORFKP (100% identity) | Hwi430ORF6795P | |
| 6785 | RNA-directed DNA polymerase | |||
| 6790 | S | S1.Hwi488ORF7215P (65% identity) | S1.Hwi430ORF6795P | |
| 6795 | M | M.Hwi430ORFMP (98% identity) | M.Hwi430ORF6795P | |
| 6800 | methyl-accepting chemotaxis protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 260 | DUF2798 domain-containing protein | |||
| ??? | RM | Hwi7711ORF265P (72% identity) | Hwi430ORFGP | |
| 275 | QacE family quaternary ammonium compound efflux | |||
| 660 | 343 aa hypothetical protein | |||
| 665 | M | M.Hwi431ORF660P (95% identity) | GATC | M.Hwi430ORFDP |
| 670 | R | Hbi43879ORF2071P (94% identity) | GATC | Hwi430ORFDP |
| 675 | adenylosuccinate lyase | |||
| 1530 | dihydroxy-acid dehydratase | |||
| 1535 | M | M1.Hwi7711ORF1530P (100% identity) | CCTC | M2.Hwi430ORF341P |
| 1540 | M | M2.Hwi7711ORF1530P (100% identity) | CCTC | M1.Hwi430ORF341P |
| 1545 | R | Hwi7711ORF1530P (100% identity) | CCTC | Hwi430ORF341P |
| 1550 | class I SAM-dependent methyltransferase | |||
| 1830 | flagellar basal body P-ring protein FlgI | |||
| 1835 | R | Hwi7711ORF1835P (100% identity) | TCGA | Hwi430ORFCP |
| 1840 | M | M.Hwi7711ORF1835P (100% identity) | TCGA | M.Hwi430ORFCP |
| 1845 | 115 aa hypothetical protein | |||
| 4320 | 216 aa hypothetical protein | |||
| 4325 | M | M.Hwi2049ORF3825P (39% identity) | M.Hwi430ORF4325P | |
| 4330 | FeoA domain-containing protein | |||
| 5050 | 100 aa hypothetical protein | |||
| 5055 | M | M.Hwi488ORF5470P (100% identity) | M.Hwi430ORFIP | |
| 5060 | phage tail protein | |||
| 7980 | ribonuclease J | |||
| ??? | RM | Hwi431ORF8195P (97% identity) | Hwi430ORFPP | |
| 8000 | DUF2443 domain-containing protein | |||