Helicobacter winghamensis DSM 111488 |
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Putative Helicobacter winghamensis DSM 111488 RM systems
Ref: Majcher,M. et al. unpublished
REBASE ref # 36248
Complete sequence: 1,734,736 bp
GenBank #: CP063530
REBASE acronym: Hwi488
Org_num: 65266
All begin IP362_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | 179 aa hypothetical protein | |||
| 2215 | M | M.Cup197059ORF1382P (99% identity) | M.Hwi488ORF2215P | |
| 2220 | S | S.Cup3940ORF1339P (98% identity) | S1.Hwi488ORF2215P | |
| 2225 | S | S2.Hwi7711ORF2180P (31% identity) | S2.Hwi488ORF2215P | |
| 2230 | 483 aa hypothetical protein | |||
| 7175 | aminoacetone oxidase family FAD-binding enzyme | |||
| 7180 | S | S2.Hwi430ORF6795P (100% identity) | S2.Hwi488ORF7215P | |
| 7185 | Holliday junction branch migration DNA helicase | |||
| 7190 | 3-methyl-2-oxobutanoate | |||
| 7195 | 123 aa hypothetical protein | |||
| 7200 | R | Hwi430ORFKP (99% identity) | Hwi488ORF7215P | |
| 7205 | RNA-directed DNA polymerase | |||
| 7210 | S | S1.Hwi430ORF6795P (65% identity) | S1.Hwi488ORF7215P | |
| 7215 | M | M.Hwi7711ORF6725P (99% identity) | M.Hwi488ORF7215P | |
| 7220 | methyl-accepting chemotaxis protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 675 | 343 aa hypothetical protein | |||
| 680 | R | M.Cup11840ORF1165P (72% identity) | Hwi488ORF685P | |
| 685 | M | M.Hci629ORFSP (88% identity) | M.Hwi488ORF685P | |
| 690 | adenylosuccinate lyase | |||
| 1545 | dihydroxy-acid dehydratase | |||
| 1550 | M | M1.Hwi7711ORF1530P (100% identity) | M1.Hwi488ORF1550P | |
| 1555 | M | M2.Hwi7711ORF1530P (100% identity) | CCTC | M2.Hwi488ORF1550P |
| 1560 | R | Hwi7711ORF1530P (100% identity) | CCTC | Hwi488ORF1550P |
| 1565 | class I SAM-dependent methyltransferase | |||
| 1845 | flagellar basal body P-ring protein FlgI | |||
| 1850 | R | Hwi7711ORF1835P (100% identity) | TCGA | Hwi488ORF1855P |
| 1855 | M | M.Hwi7711ORF1835P (100% identity) | TCGA | M.Hwi488ORF1855P |
| 1860 | 115 aa hypothetical protein | |||
| 4070 | 100 aa hypothetical protein | |||
| 4075 | M | M.Hwi488ORF5470P (100% identity) | M.Hwi488ORF4075P | |
| 4080 | phage tail protein | |||
| 4395 | site-specific DNA-methyltransferase | |||
| 4400 | M | Hwi7711ORF3905P (50% identity) | M.Hwi488ORF4400P | |
| 4405 | glutamine-hydrolyzing GMP synthase | |||
| 5465 | 100 aa hypothetical protein | |||
| 5470 | M | M.Hwi488ORF4075P (100% identity) | M.Hwi488ORF5470P | |
| 5475 | phage tail protein | |||
| 8410 | ribonuclease J | |||
| ??? | RM | Hwi430ORFPP (98% identity) | Hwi488ORF8415P | |
| 8435 | DUF2443 domain-containing protein | |||
| 8775 | fumarylacetoacetate hydrolase family protein | |||
| 8780 | S | S.Hwi431ORF8555P (95% identity) | S.Hwi488ORF8785P | |
| 8785 | RM | Hwi431ORF8555P (97% identity) | Hwi488ORF8785P | |
| 8795 | pseudogene | |||