Xanthomonas oryzae GDV |
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Putative Xanthomonas oryzae GDV RM systems
Ref: Zhou,Y. unpublished
REBASE ref # 23611
Complete sequence: 4,926,794 bp
GenBank #: CP086193
REBASE acronym: XorGDV
Org_num: 65625
All begin LL918_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6810 | 88 aa hypothetical protein | |||
| 6815 | R | XorOS198ORF550P (100% identity) | GGAYNNNNCTG | XorGDVORF6840P |
| 6820 | 224 aa hypothetical protein | |||
| 6825 | abortive infection family protein | |||
| 6830 | S | S.XorPXO61ORF18385P (100% identity) | GGAYNNNNCTG | S.XorGDVORF6840P |
| 6835 | nucleotidyltransferase substrate binding | |||
| 6840 | M | M.XorZ173ORF6425P (100% identity) | GGAYNNNNCTG | M.XorGDVORF6840P |
| 6845 | restriction endonuclease | |||
| 6855 | 87 aa hypothetical protein | |||
| 6860 | R | XorOS198ORF580P (100% identity) | XorGDVORF6870P | |
| 6865 | Abi family protein | |||
| 6870 | M | M.XorOS198ORF580P (100% identity) | M.XorGDVORF6870P | |
| 6875 | S | S.XorOS198ORF580P (100% identity) | S.XorGDVORF6870P | |
| 6880 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15645 | MobC family plasmid mobilization relaxosome | |||
| 15650 | V | V.XorPXO61ORF3170P (100% identity) | CGATCG | V.XorGDVORF15655P |
| 15655 | M | M.XorPXO61ORF3170P (100% identity) | CGATCG | M.XorGDVORF15655P |
| 15660 | R | XorPXO61ORF3170P (100% identity) | CGATCG | XorGDVORF15655P |
| 15665 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10660 | Fic family protein | |||
| 10665 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.XorGDVORF10665P |
| 10670 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6840 | type I restriction-modification system subunit | |||
| 6845 | R | XorZ173MrrP (100% identity) | XorGDVMrrP | |
| 6850 | type II toxin-antitoxin system RelE/ParE family | |||