Fusobacterium nucleatum FNV |
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Putative Fusobacterium nucleatum FNV RM systems
Ref: Feng,Q. and Sun,T. unpublished
REBASE ref # 36147
Complete sequence: 2,194,806 bp
GenBank #: CP117525
REBASE acronym: FnuFNV
Org_num: 64923
All begin PSR69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8205 | MATE family efflux transporter | |||
| 8210 | R | Fsp4113ORFHP (99% identity) | ATAYNNNNNNNTGG | FnuFNVORF8250P |
| 8215 | 144 aa hypothetical protein | |||
| 8220 | AAA family ATPase | |||
| 8225 | S | S.FnuN7B5III (100% identity) | ATAYNNNNNNNTGG | S.FnuFNVORF8250P |
| 8230 | 44 aa hypothetical protein | |||
| 8235 | 70 aa hypothetical protein | |||
| 8240 | ATP-binding protein | |||
| 8245 | DNA binding domain-containing protein | |||
| 8250 | M | M.FnuN7B5III (100% identity) | ATAYNNNNNNNTGG | M.FnuFNVORF8250P |
| 8255 | cyclically-permuted mutarotase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 465 | valine--tRNA ligase | |||
| 470 | RM | FnuA16II (100% identity) | GAGNNNNRTAY | FnuFNVORF470P |
| 475 | S | S.FnuA16II (100% identity) | GAGNNNNRTAY | S.FnuFNVORF470P |
| 480 | MarR family transcriptional regulator | |||
| 6080 | 172 aa hypothetical protein | |||
| 6085 | M | M.FnuSB055IV (61% identity) | M.FnuFNVORF6085AP | |
| 6090 | M | M.FnuSB055IV (23% identity) | M.FnuFNVORF6085BP | |
| 6095 | chromosome segregation protein SMC | |||
| 10045 | exodeoxyribonuclease III | |||
| ??? | M | M.FnuSB15ORF210P (100% identity) | M.FnuFNVORF10050P | |
| 10060 | type II 3-dehydroquinate dehydratase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9500 | RidA family protein | |||
| 9505 | R | FnuA16ORF9475P (100% identity) | FnuFNVORF9505P | |
| 9510 | DEAD/DEAH box helicase | |||