Paracoccus stylophorae LMG25392 |
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Putative Paracoccus stylophorae LMG25392 RM systems
Ref: Hollensteiner,J. et al. unpublished
REBASE ref # 36169
Complete sequence: 3,634,760 bp
GenBank #: CP067134
REBASE acronym: Pst25392
Org_num: 64982
All begin JHW45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6870 | 131 aa hypothetical protein | |||
| 6875 | R | Psp4604IIP (99% identity) | Pst25392ORF6880P | |
| 6880 | M | M.RbaLa6ORF6077P (97% identity) | M.Pst25392ORF6880P | |
| 6885 | S | S.RspHJORF5195P (94% identity) | S.Pst25392ORF6880P | |
| 6890 | three-Cys-motif partner protein TcmP | |||
| 11640 | type II toxin-antitoxin system Phd/YefM family | |||
| 11645 | M | M.AcaMTH04ORF5780P (67% identity) | M.Pst25392ORF11645P | |
| ??? | S | S.Bgl257ORF12060P (35% identity) | S.Pst25392ORF11645P | |
| 11655 | IS3 family transposase | |||
| 12495 | 129 aa hypothetical protein | |||
| 12500 | R | Pfi22803ORF2080P (97% identity) | Pst25392ORF12515P | |
| 12505 | abortive infection family protein | |||
| 12510 | S | S.Pfi22803ORF2080P (53% identity) | S.Pst25392ORF12515P | |
| 12515 | M | M.Pfi22803ORF2080P (85% identity) | M.Pst25392ORF12515P | |
| 12520 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 930 | 74 aa hypothetical protein | |||
| 935 | M | M.Pam7685ORF117P (99% identity) | M1.Pst25392ORF935P | |
| 940 | DNA cytosine methyltransferase | |||
| 945 | M | M.Pam7685ORF115P (99% identity) | M2.Pst25392ORF935P | |
| 950 | 162 aa hypothetical protein | |||
| 975 | site-specific integrase | |||
| 980 | RM | PcoRK1ORF2555P (89% identity) | Pst25392ORF980P | |
| 985 | 503 aa hypothetical protein | |||
| 3560 | uncharacterized protein | |||
| 3575 | R | RspAK1035ORF2530P (74% identity) | Pst25392ORF3590P | |
| 3580 | type II toxin-antitoxin system VapC family | |||
| 3585 | 363 aa hypothetical protein | |||
| 3590 | M | M.TspHJORF8110P (76% identity) | M.Pst25392ORF3590P | |
| 3595 | 83 aa hypothetical protein | |||
| 6495 | IS110 family transposase | |||
| 6500 | M | M2.Ssu3ORF1490P (87% identity) | M1.Pst25392ORF6500P | |
| 6505 | M | M2.Szo19623ORF16935P (97% identity) | M2.Pst25392ORF6500P | |
| 6510 | helix-turn-helix domain-containing protein | |||
| 6580 | 143 aa hypothetical protein | |||
| 6585 | M | M.Asp52161ORF10705P (94% identity) | M.Pst25392ORF6585P | |
| 6590 | ATP-binding protein | |||
| 6775 | IS110 family transposase | |||
| 6780 | M | M1.Pst25392ORF12025P (95% identity) | M1.Pst25392ORF6780P | |
| 6785 | M | M1.PveUW1ORF10505P (93% identity) | M2.Pst25392ORF6780P | |
| 6790 | helix-turn-helix domain-containing protein | |||
| 8145 | IS30 family transposase | |||
| 8150 | RM | Psp2928ORF3980P (76% identity) | Pst25392ORF8150P | |
| 8155 | type II toxin-antitoxin system RelE/ParE family | |||
| 11005 | helix-turn-helix domain-containing protein | |||
| 11010 | M | M2.Pst25392ORF12025P (100% identity) | M1.Pst25392ORF11010P | |
| 11015 | M | M1.Pst25392ORF12025P (100% identity) | M2.Pst25392ORF11010P | |
| 11020 | IS110 family transposase | |||
| 11420 | 94 aa hypothetical protein | |||
| 11425 | M | M2.Szo19623ORF16935P (95% identity) | M.Pst25392ORF11425P | |
| 11430 | tyrosine-type recombinase/integrase | |||
| 11700 | 66 aa hypothetical protein | |||
| 11705 | M | M2.Szo19623ORF16935P (95% identity) | M.Pst25392ORF11705P | |
| 11710 | tyrosine-type recombinase/integrase | |||
| 11880 | ImmA/IrrE family metallo-endopeptidase | |||
| 11885 | RM | TprJLTORF4699P (72% identity) | Pst25392ORF11885P | |
| 11890 | DEAD/DEAH box helicase | |||
| 11925 | IS3 family transposase | |||
| 11930 | M | M.Pgi3ORF2596P (75% identity) | M.Pst25392ORF11930P | |
| 11935 | type II toxin-antitoxin system | |||
| 12020 | IS110 family transposase | |||
| 12025 | M | M2.Pst25392ORF11010P (100% identity) | M1.Pst25392ORF12025P | |
| 12030 | M | M1.Pst25392ORF11010P (100% identity) | M2.Pst25392ORF12025P | |
| 12035 | helix-turn-helix domain-containing protein | |||
| 12395 | 74 aa hypothetical protein | |||
| 12400 | M | M.PspS343ORF8305P (100% identity) | M.Pst25392ORF12400P | |
| 12405 | site-specific DNA-methyltransferase | |||
| 12400 | DNA cytosine methyltransferase | |||
| 12405 | M | M.PspS343ORF8310P (98% identity) | M.Pst25392ORF12405P | |
| 12410 | 148 aa hypothetical protein | |||
| 14195 | GSCFA domain-containing protein | |||
| 14200 | M | M.Pfi22803ORF13375P (91% identity) | M.Pst25392ORF14200P | |
| 14205 | ribonuclease HII | |||
| 14645 | molybdopterin adenylyltransferase | |||
| 14650 | R | Pae19484aORF18065P (55% identity) | Pst25392ORF14650P | |
| 14655 | argininosuccinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11285 | 128 aa hypothetical protein | |||
| 11290 | R | Pye20ORF8890P (99% identity) | Pst25392ORF11295P | |
| 11295 | M | M.CsaAK4ORF1043P (80% identity) | M.Pst25392ORF11295P | |
| 11300 | 133 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 755 | uncharacterized protein | |||
| 770 | R | MspEN3GmrSDP (65% identity) | Pst25392GmrSDP | |
| 775 | 71 aa hypothetical protein | |||