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Putative Neisseria gonorrhoeae SE690. RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,170,090 bp
GenBank #: CP116342
REBASE acronym: Ngo690
Org_num: 64969
All begin PH604_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3525 | replication-associated recombination protein A | |||
3530 | R | NgoCT213ORF3510P (99% identity) | GAGNNNNNTAC | Ngo690ORF3555P |
3535 | hydroxyacid dehydrogenase | |||
3540 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo690ORF3555P |
3545 | 186 aa hypothetical protein | |||
3550 | 280 aa hypothetical protein | |||
3555 | M | M.Ngo1204ORF3530P (99% identity) | GAGNNNNNTAC | M.Ngo690ORF3555P |
3560 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo690ORF35P |
40 | site-specific DNA-methyltransferase | |||
35 | DpnI domain-containing protein | |||
??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo690ORFAP |
45 | 184 aa hypothetical protein | |||
1495 | phenylalanine--tRNA ligase subunit alpha | |||
1500 | V | V.NgoWSORF391P (100% identity) | V.Ngo690ORF1505P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo690ORF1505P |
1510 | R | NgoTFGB2ORF299P (100% identity) | CCGG | Ngo690ORF1505P |
1515 | phenylalanine--tRNA ligase subunit beta | |||
1785 | IS1595 family transposase | |||
1790 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo690ORF1790P |
1795 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo690ORF1790P |
1800 | protein Gly1ORF1 | |||
1820 | uroporphyrinogen decarboxylase | |||
1825 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo690ORF1835P | |
1830 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo690ORF1835P |
1835 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo690ORF1835P |
1840 | DNA repair protein RadA | |||
3415 | 3-isopropylmalate dehydrogenase | |||
3420 | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo690ORF3425P |
3425 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo690ORF3425P |
3430 | 3-isopropylmalate dehydratase small subunit | |||
4410 | anthranilate synthase component I | |||
4415 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo690ORF4415P |
4420 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo690ORF4415P |
4425 | 5-(carboxyamino)imidazole ribonucleotide | |||
5755 | replication initiation factor domain-containing | |||
5760 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo690ORF5775P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo690ORF5775P |
5775 | M | M.Ngo5ORF3250BP (100% identity) | M.Ngo690ORF5775BP | |
5780 | M | M.NgoD159ORF475AP (100% identity) | M.Ngo690ORF5775AP | |
5785 | 48 aa hypothetical protein | |||
5970 | excinuclease ABC subunit UvrA | |||
5975 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo690ORF5980P |
5980 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo690ORF5980P |
5985 | 62 aa hypothetical protein | |||
9240 | FUSC family protein | |||
9245 | R | Ngos1291ORF3515P (99% identity) | GGCC | Ngo690ORF9250P |
9250 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo690ORF9250P |
9255 | ribosome recycling factor | |||
9790 | 93 aa hypothetical protein | |||
9795 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo690ORF9800P |
9800 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo690ORF9800P |
9805 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.Ngo690ORF9800P |
9810 | Tex family protein | |||
10350 | GTPase ObgE | |||
10355 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo690ORF10355P |
10360 | R | NgoNG250ORF10820P (100% identity) | RGCGCY | Ngo690ORF10355P |
10365 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2765 | peptidylprolyl isomerase | |||
2770 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo690ORF2770P | |
2775 | R | Ngos1291ORF8455P (100% identity) | Ngo690ORF2770P | |
2780 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3230 | alpha-hydroxy acid oxidase | |||
3235 | R | Ngo1204ORF3220P (100% identity) | Ngo690ORF3240P | |
3240 | M | M.Ngo1204ORF3220P (81% identity) | M.Ngo690ORF3240P | |
3250 | tRNA pseudouridine(55) synthase TruB |