Escherichia coli EC9952 |
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Putative Escherichia coli EC9952 RM systems
Ref: Lin,J. et al. unpublished
REBASE ref # 35373
| Sequence length: | GenBank #: | |
| Chromosome: | 4,924,691 bp | CP104595 |
| plasmid pEC9952-1: | 157,264 bp | CP104596 |
REBASE acronym: Eco9952
Org_num: 64685
All begin N5B57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4030 | transposase | |||
| 4035 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco9952ORF4040P |
| 4040 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco9952ORF4040P |
| 4045 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco9952ORF4040P |
| 4050 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9952DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 9510 | phosphohydrolase | |||
| 9515 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco9952DcmP |
| 9520 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco9952DcmP |
| 9525 | drug/metabolite exporter YedA | |||
| 18405 | phage lysis protein EssD | |||
| 18410 | M | M.Sso63633ORF22290P (100% identity) | M.Eco9952ORF18410P | |
| 18415 | TrmB family transcriptional regulator | |||
| 20700 | DUF3780 domain-containing protein | |||
| 20705 | M | M.EcofEC1ORF1985P (100% identity) | RGACAG | M.Eco9952ORF20705P |
| 20710 | phospholipase D-like domain-containing protein | |||
| plasmid pEC9952-1 | ||||
| 23875 | 73 aa hypothetical protein | |||
| 23880 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco9952ORF23880P |
| 23885 | 103 aa hypothetical protein | |||