Pseudomonas aeruginosa 2872 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa 2872 RM systems
Ref: Anbo,M. et al. unpublished
REBASE ref # 36103
Complete sequence: 7,112,465 bp
GenBank #: CP116723
REBASE acronym: Pae2872
Org_num: 64784
All begin PMJ89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21620 | IS3-like element IS222 family transposase | |||
| 21625 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | Pae2872ORF21665P |
| 21630 | McrC family protein | |||
| 21635 | AAA family ATPase | |||
| 21640 | DEAD/DEAH box helicase | |||
| 21645 | EH signature domain-containing protein | |||
| 21650 | OmpA family protein | |||
| 21655 | anti-phage ZorAB system protein ZorA | |||
| 21660 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.Pae2872ORF21665P |
| 21665 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.Pae2872ORF21665P |
| 21670 | tyrosine-type recombinase/integrase | |||
| 32505 | helix-turn-helix domain-containing protein | |||
| 32510 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | Pae2872ORF32525P |
| 32515 | DNA binding domain-containing protein | |||
| 32520 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.Pae2872ORF32525P |
| 32525 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.Pae2872ORF32525P |
| 32530 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5310 | recombinase family protein | |||
| 5315 | M | M.PmeTTORFEP (96% identity) | CTCGAG | M.Pae2872ORF5315P |
| 5320 | R | PmeTTORFEP (100% identity) | CTCGAG | Pae2872ORF5315P |
| 5325 | 82 aa hypothetical protein | |||
| 21710 | AAA family ATPase | |||
| 21715 | M | M.PaesAG1ORF2662P (100% identity) | M.Pae2872ORF21715P | |
| 21720 | IS66 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21625 | type I restriction endonuclease subunit R | |||
| 21630 | R | Psp2021McrCP (100% identity) | Pae2872McrCP | |
| 21635 | R | PaeUKJ55McrBP (100% identity) | Pae2872McrBP | |
| 21640 | DEAD/DEAH box helicase | |||