Tenacibaculum finnmarkense LI C6 FM3-F |
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Putative Tenacibaculum finnmarkense LI C6 FM3-F RM systems
Ref: Nowlan,J.P. et al. unpublished
REBASE ref # 36039
Complete sequence: 2,936,017 bp
GenBank #: CP116297
REBASE acronym: TfiFM3F
Org_num: 64587
All begin PJJ26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5525 | AAA family ATPase | |||
| 5530 | S | S.Tfi25761ORF6305P (60% identity) | S.TfiFM3FORF5535P | |
| 5535 | M | M.TdiTDORF5205P (98% identity) | M.TfiFM3FORF5535P | |
| 5540 | R | TdiTDORF5205P (99% identity) | TfiFM3FORF5535P | |
| 5545 | type IX secretion system membrane protein | |||
| 5555 | R | Tdi3141ORF8790P (93% identity) | TfiFM3FORF5580P | |
| 5560 | 811 aa hypothetical protein | |||
| 5565 | 586 aa hypothetical protein | |||
| 5570 | S | S.Hha10839I (71% identity) | S2.TfiFM3FORF5580P | |
| 5575 | S | S.FcoFCOF9ORF6520P (62% identity) | S1.TfiFM3FORF5580P | |
| 5580 | M | M.Tdi3141ORF8790P (97% identity) | M.TfiFM3FORF5580P | |
| 5585 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6540 | RsmD family RNA methyltransferase | |||
| 6545 | RM | Tfi41062ORF6005P (100% identity) | TfiFM3FORF6545P | |
| 6550 | ATP-binding cassette domain-containing protein | |||
| 7715 | 182 aa hypothetical protein | |||
| 7720 | R | TdiTDORF7660P (77% identity) | TfiFM3FORF7725P | |
| 7725 | M | M.TdiTDORF7660P (95% identity) | M.TfiFM3FORF7725P | |
| 7730 | IS3 family transposase | |||
| 8775 | site-specific integrase | |||
| 8780 | RM | TdiTDORF8200P (95% identity) | TfiFM3FORF8780P | |
| ??? | S | S.Csp534ORF1635P (68% identity) | S.TfiFM3FORF8780P | |
| 8790 | zincin-like metallopeptidase domain-containing | |||
| 9715 | helix-turn-helix transcriptional regulator | |||
| 9720 | RM | PspSM13ORF8125P (78% identity) | TfiFM3FORF9725P | |
| 9725 | M | M.PspSM13ORF8125P (86% identity) | M.TfiFM3FORF9725P | |
| 9730 | 297 aa hypothetical protein | |||
| 9805 | 235 aa hypothetical protein | |||
| 9810 | M | M.PspQ13ORF12655P (79% identity) | M.TfiFM3FORF9810P | |
| 9815 | peptide chain release factor 1 | |||
| 10580 | alkaline phosphatase family protein | |||
| 10585 | RM | TdiTDORF9885P (63% identity) | TfiFM3FORF10585P | |
| 10590 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2610 | aminotransferase class III-fold pyridoxal | |||
| 2615 | R | Cba4Mrr2P (92% identity) | TfiFM3FMrrP | |
| 2620 | 72 aa hypothetical protein | |||
| 5515 | SulP family inorganic anion transporter | |||
| 5520 | R | TdiTDMcrCP (98% identity) | TfiFM3FMcrCP | |
| 5525 | R | TdiTDMcrBP (50% identity) | TfiFM3FMcrBP | |
| 5530 | restriction endonuclease subunit S | |||
| 12880 | (deoxy)nucleoside triphosphate | |||
| 12885 | R | TdiTDORF12160P (99% identity) | TfiFM3FORF12885P | |
| 12890 | DEAD/DEAH box helicase | |||