Ruminococcus species FMB-CY1 |
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Putative Ruminococcus species FMB-CY1 RM systems
Ref: Hong,Y.S. et al. Food Sci Biotechnol 31 (2), 231-241 (2022)
REBASE ref # 36031
Complete sequence: 2,375,995 bp
GenBank #: CP084034
REBASE acronym: RspCY1
Org_num: 64534
All begin LCN94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1660 | DUF262 domain-containing HNH endonuclease family | |||
| 1665 | S | S.RspFMBCY1ORF6635P (100% identity) | S.RspCY1ORF1670P | |
| 1670 | M | M.RspFMBCY1ORF6635P (100% identity) | M.RspCY1ORF1670P | |
| 1675 | R | RspFMBCY1ORF6635P (100% identity) | RspCY1ORF1670P | |
| 1680 | replication initiator protein A | |||
| 5075 | SLATT domain-containing protein | |||
| 5080 | R | RspFMBCY1ORF3210P (100% identity) | RspCY1ORF5090P | |
| 5085 | S | S.RspFMBCY1ORF3210P (100% identity) | S.RspCY1ORF5090P | |
| 5090 | M | M.RspFMBCY1ORF3210P (100% identity) | M.RspCY1ORF5090P | |
| 5095 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5830 | 107 aa hypothetical protein | |||
| 5835 | M | M.RspFMBCY1ORF2465P (98% identity) | M.RspCY1ORF5835P | |
| 5840 | 257 aa hypothetical protein | |||
| 5870 | amidoligase family protein | |||
| 5875 | M | M.PmeBin244ORFDP (100% identity) | M.RspCY1ORF5875P | |
| 5880 | 190 aa hypothetical protein | |||
| 8405 | 72 aa hypothetical protein | |||
| 8410 | M | M2.RspFMBCY1ORF11575P (97% identity) | M1.RspCY1ORF8410P | |
| 8415 | M | M1.RspFMBCY1ORF11575P (96% identity) | M2.RspCY1ORF8410P | |
| 8420 | DUF4314 domain-containing protein | |||
| 9845 | helix-turn-helix transcriptional regulator | |||
| 9850 | M | M.RspFMBCY1ORF10145P (100% identity) | M.RspCY1ORF9850P | |
| 9855 | holin | |||
| 11065 | alpha-glucosidase | |||
| 11070 | R | RspFMBCY1ORF8920P (100% identity) | RspCY1ORF11075P | |
| 11075 | M | M.RspFMBCY1ORF8920P (100% identity) | M.RspCY1ORF11075P | |
| 11080 | helix-turn-helix transcriptional regulator | |||
| 11120 | xanthine phosphoribosyltransferase | |||
| 11125 | M | M.RspFMBCY1ORF8870P (100% identity) | M.RspCY1ORF11125P | |
| 11130 | R | RspFMBCY1ORF8870P (100% identity) | RspCY1ORF11125P | |
| 11135 | helix-turn-helix domain-containing protein | |||
| 11140 | 220 aa hypothetical protein | |||
| 11145 | R | RspFMBCY1ORF8845P (100% identity) | RspCY1ORF11150P | |
| 11150 | M | M.RspFMBCY1ORF8845P (100% identity) | M.RspCY1ORF11150P | |
| 11155 | Eco57I restriction-modification methylase | |||
| 11150 | class I SAM-dependent methyltransferase | |||
| 11155 | RM | RspFMBCY1ORF8840P (100% identity) | RspCY1ORF11155P | |
| 11160 | TnpV protein | |||
| 11430 | transporter substrate-binding domain-containing | |||
| 11435 | M | M2.RspFMBCY1ORF8550P (100% identity) | M1.RspCY1ORF11435P | |
| 11440 | R | RspFMBCY1ORF8550P (100% identity) | RspCY1ORF11435P | |
| 11445 | M | M1.RspFMBCY1ORF8550P (100% identity) | M2.RspCY1ORF11435P | |
| 11450 | DUF3783 domain-containing protein | |||