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Putative Neisseria gonorrhoeae MS11 HL-1-22 RM systems
Ref: Ozer,E.A. et al. unpublished
REBASE ref # 36023
Complete sequence: 2,259,189 bp
GenBank #: CP115904
REBASE acronym: NgoHL122
Org_num: 64495
All begin OK782_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2060 | ADP-glyceromanno-heptose 6-epimerase | |||
2065 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoHL122ORF2065P |
2070 | DNA damage-inducible protein D | |||
??? | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | S.NgoHL122ORF2065P |
2085 | R | NgoMS11ORF4820P (100% identity) | GCANNNNNNNGTC | NgoHL122ORF2065P |
2090 | ATP-dependent Clp protease ATP-binding subunit | |||
3555 | replication-associated recombination protein A | |||
3560 | R | NgoMS11ORF6305P (100% identity) | GAGNNNNNTAC | NgoHL122ORF3585P |
3565 | hydroxyacid dehydrogenase | |||
3570 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoHL122ORF3585P |
3575 | 186 aa hypothetical protein | |||
3580 | 280 aa hypothetical protein | |||
??? | M | M.NgoNG250ORF4770P (100% identity) | GAGNNNNNTAC | M.NgoHL122ORF3585P |
3600 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | NgoPID18ORF231P (100% identity) | GATC | NgoHL122ORF40P |
??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoHL122ORF40P |
45 | 184 aa hypothetical protein | |||
1825 | IS1595 family transposase | |||
1830 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoHL122ORF1830P |
1835 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoHL122ORF1830P |
1840 | protein Gly1ORF1 | |||
1860 | uroporphyrinogen decarboxylase | |||
1865 | H | H.NgoN160ORF1885P (100% identity) | H.NgoHL122ORF1875P | |
1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoHL122ORF1875P |
1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoHL122ORF1875P |
1880 | DNA repair protein RadA | |||
3435 | 3-isopropylmalate dehydrogenase | |||
3440 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoHL122ORF3445P |
3445 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoHL122ORF3445P |
3450 | 3-isopropylmalate dehydratase small subunit | |||
4785 | anthranilate synthase component I | |||
4790 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoHL122ORF4790P |
4795 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoHL122ORF4790P |
4800 | 5-(carboxyamino)imidazole ribonucleotide | |||
6290 | replication initiation factor domain-containing | |||
6295 | V | V.Ngos1291ORF65P (90% identity) | V.NgoHL122ORF6310P | |
??? | R | NgoWSORF1801P (100% identity) | CCGG | NgoHL122ORF6310P |
??? | M | M.NgoMS11ORF8845P (100% identity) | CCGG | M.NgoHL122ORF6310P |
6320 | 48 aa hypothetical protein | |||
6510 | excinuclease ABC subunit UvrA | |||
6515 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoHL122ORF6520P |
6520 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoHL122ORF6520P |
6525 | 62 aa hypothetical protein | |||
9810 | FUSC family protein | |||
??? | R | NgoMS11ORF580P (100% identity) | GGCC | NgoHL122ORF9825P |
9825 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoHL122ORF9825P |
9830 | ribosome recycling factor | |||
10365 | 93 aa hypothetical protein | |||
10370 | R | NgoWSIIIP (100% identity) | GGTGA | NgoHL122ORF10375P |
10375 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoHL122ORF10375P |
10380 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoHL122ORF10375P |
10385 | Tex family protein | |||
10925 | GTPase ObgE | |||
10930 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoHL122ORF10930P |
10935 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoHL122ORF10930P |
10940 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2790 | peptidylprolyl isomerase | |||
2795 | M | M.NgoH035ORF5680P (100% identity) | M.NgoHL122ORF2795P | |
2800 | R | Ngos1291ORF8455P (100% identity) | NgoHL122ORF2795P | |
2805 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3255 | alpha-hydroxy acid oxidase | |||
3260 | R | NgoWSORF749P (100% identity) | GCAGA | NgoHL122ORF3265P |
3265 | M | M.NgoMS11ORF5990P (100% identity) | GCAGA | M.NgoHL122ORF3265P |
3270 | tRNA pseudouridine(55) synthase TruB |