Escherichia coli 2022CK-00558 |
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Putative Escherichia coli 2022CK-00558 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 4,936,300 bp | CP114344 |
| plasmid unnamed1: | 131,430 bp | CP114345 |
| plasmid unnamed2: | 105,465 bp | CP114346 |
REBASE acronym: Eco00558
Org_num: 64071
All begin OIX84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18430 | type IV toxin-antitoxin system AbiEi family | |||
| 18435 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco00558ORF18440P |
| 18440 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco00558ORF18440P |
| 18445 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco00558ORF18440P |
| 18450 | ash family protein | |||
| plasmid unnamed2 | ||||
| 25165 | IS1-like element IS1A family transposase | |||
| 25170 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco00558ORF25180P |
| 25175 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco00558ORF25180P |
| 25180 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.Eco00558ORF25180P |
| 25185 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 485 | BREX-1 system phosphatase PglZ type A | |||
| 490 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco00558ORF490P |
| 495 | BREX system P-loop protein BrxC | |||
| 2030 | cell division protein DamX | |||
| 2035 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco00558DamP |
| 2040 | ribulose-phosphate 3-epimerase | |||
| 2630 | DUF2556 family protein | |||
| 2635 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco00558ORF2635P |
| 2640 | DNA-binding transcriptional regulator Fis | |||
| 10015 | phosphohydrolase | |||
| 10020 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco00558DcmP |
| 10025 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco00558DcmP |
| 10030 | drug/metabolite exporter YedA | |||
| 20385 | McrC family protein | |||
| 20390 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco00558ORF20395P |
| 20395 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco00558ORF20395P |
| 20400 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco00558ORF20395P |
| 20405 | helix-turn-helix domain-containing protein | |||
| 20670 | 166 aa hypothetical protein | |||
| 20675 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco00558ORF20675P |
| 20680 | ATP-binding protein | |||
| 20685 | response regulator receiver domain | |||
| 20690 | R | Ecos19ORF20635P (100% identity) | Eco00558ORF20690P | |
| 20695 | 97 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 24125 | 103 aa hypothetical protein | |||
| 24130 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco00558ORF24130P | |
| 24135 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25105 | 73 aa hypothetical protein | |||
| 25110 | M | M.Sen21978ORF23935P (99% identity) | M.Eco00558ORF25110P | |
| 25115 | 103 aa hypothetical protein | |||