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Putative Avibacterium paragallinarum C-AP1 RM systems
Ref: Zhang,J.P. unpublished
REBASE ref # 35746
Complete sequence: 2,614,420 bp
GenBank #: CP113786
REBASE acronym: ApaCAP1
Org_num: 63619
All begin OY678_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1575 | pyridoxal phosphate-dependent aminotransferase | |||
1580 | R | Apap4ORF1655P (100% identity) | ApaCAP1ORF1600P | |
1585 | ATP F0F1 synthase synthase | |||
1590 | S | S.Apap4ORF1655P (100% identity) | S.ApaCAP1ORF1600P | |
1595 | DNA binding domain-containing protein | |||
1600 | M | M.Apap4ORF1655P (100% identity) | M.ApaCAP1ORF1600P | |
1605 | fatty acid metabolism transcriptional regulator | |||
6240 | MFS transporter | |||
6245 | S | S3.Apap4ORF12165P (100% identity) | S1.ApaCAP1ORF6245P | |
6250 | S | S2.Apap4ORF12165P (100% identity) | S2.ApaCAP1ORF6245P | |
6255 | S | S1.Apap4ORF12165P (100% identity) | S3.ApaCAP1ORF6245P | |
6260 | R | Apap4ORF12165P (100% identity) | ApaCAP1ORF6245P | |
6265 | DUF262 domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2930 | 30S ribosomal protein S12 methylthiotransferase | |||
2935 | RM | Apap4ORF13055P (100% identity) | ApaCAP1ORF2945P | |
2940 | M | M2.Apap4ORF13055P (100% identity) | M2.ApaCAP1ORF2945P | |
2945 | M | M1.Apap4ORF13055P (100% identity) | M1.ApaCAP1ORF2945P | |
2950 | 153 aa hypothetical protein | |||
4250 | endolytic transglycosylase MltG | |||
4255 | S | S.Apap4ORF9860P (81% identity) | S.ApaCAP1ORF4260P | |
4260 | RM | ApaZ3CORFFP (99% identity) | ApaCAP1ORF4260P | |
4265 | phosphoglycerate dehydrogenase | |||
10045 | 62 aa hypothetical protein | |||
10050 | M | M.Apap4ORF2215P (100% identity) | M.ApaCAP1ORF10050P | |
10055 | DNA methyltransferase | |||
10080 | ATP-binding protein | |||
10085 | M | M.Apap4ORF7290P (100% identity) | M.ApaCAP1ORF10085P | |
10090 | recombination protein NinB | |||
10725 | 124 aa hypothetical protein | |||
10730 | M | M1.ApaESV135ORF2000P (97% identity) | M.ApaCAP1ORF10730P | |
10735 | 40 aa hypothetical protein | |||
10795 | DciA family protein | |||
10800 | M | M.ApasMORFNP (100% identity) | GATC | M.ApaCAP1ORF10800P |
10805 | 3-dehydroquinate synthase | |||
11760 | replication protein P | |||
11765 | M | M.Apap4ORF7715P (100% identity) | M.ApaCAP1ORF11765P | |
11770 | DUF1367 family protein | |||
12770 | type II toxin-antitoxin system HicA family | |||
12775 | M | M.Apap4ORF8230P (88% identity) | M.ApaCAP1ORF12775P | |
12780 | class I SAM-dependent methyltransferase | |||
12960 | 86 aa hypothetical protein | |||
12965 | M | M1.Apap4ORF7445P (26% identity) | M.ApaCAP1ORF12965AP | |
12970 | 103 aa hypothetical protein | |||
12975 | M | M1.Apap4ORF7925P (91% identity) | M.ApaCAP1ORF12965BP | |
12980 | 51 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3040 | elongation factor Tu | |||
3055 | R | Apap4ORF2990P (100% identity) | ApaCAP1ORF3060P | |
3060 | M | M.ApaCAP4ORF5175BP (100% identity) | M.ApaCAP1ORF3060BP | |
3065 | M | M.Apap4ORF2990P (40% identity) | M.ApaCAP1ORF3060AP | |
3070 | 381 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
6260 | DEAD/DEAH box helicase family protein | |||
6265 | R | ApaZ3CGmrSDP (100% identity) | ApaCAP1GmrSDP | |
6270 | virulence RhuM family protein |