Yersinia ruckeri NVI-10587 |
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Putative Yersinia ruckeri NVI-10587 RM systems
Ref: Riborg,A. et al. J Fish Dis 45 (5), 641-653 (2022)
REBASE ref # 35836
Complete sequence: 3,700,651 bp
GenBank #: CP099809
REBASE acronym: Yru10587
Org_num: 63898
All begin LNQ46_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 740 | SPOR domain-containing protein | |||
| 745 | M | M.YruSC09DamP (100% identity) | GATC | M.Yru10587DamP |
| 750 | ribulose-phosphate 3-epimerase | |||
| 2335 | 199 aa hypothetical protein | |||
| 2340 | M | M.Yru5089ORF2365P (100% identity) | M.Yru10587ORF2340P | |
| 2345 | 489 aa hypothetical protein | |||
| 4825 | 48 aa hypothetical protein | |||
| 4830 | M | M.Yru8524ORF4845P (100% identity) | M.Yru10587ORF4830P | |
| 4835 | DUF3850 domain-containing protein | |||
| 9875 | DUF2732 domain-containing protein | |||
| 9880 | M | M.YruSC09ORF10010P (93% identity) | M.Yru10587ORF9880P | |
| 9885 | replication endonuclease | |||
| 10875 | serine/threonine protein kinase | |||
| 10880 | M | M.Yru8524ORF11395P (100% identity) | M.Yru10587ORF10880P | |
| 10885 | antitermination protein | |||
| 10900 | RusA family crossover junction | |||
| 10905 | M | M.Yru8524ORF11420P (100% identity) | M.Yru10587ORF10905P | |
| 10910 | helix-turn-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15165 | DUF4156 domain-containing protein | |||
| 15170 | R | PpiDE1AORF16575P (85% identity) | Yru10587ORF15175P | |
| 15175 | M | M.PkiP48ORF21115P (82% identity) | M.Yru10587ORF15175P | |
| 15180 | helix-turn-helix domain-containing protein | |||