Pseudomonas aeruginosa C4.2 |
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Putative Pseudomonas aeruginosa C4.2 RM systems
Ref: Kiel,A. et al. unpublished
REBASE ref # 35818
Complete sequence: 7,345,639 bp
GenBank #: CP097560
REBASE acronym: PaeC42
Org_num: 63871
All begin PAC42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1505 | sigma 54-interacting transcriptional regulator | |||
| 1510 | R | PaeT27ORF15510P (100% identity) | GTANNNNNNGTCY | PaeC42ORF1515P |
| 1515 | M | M.Psp2021ORF30365P (100% identity) | GTANNNNNNGTCY | M.PaeC42ORF1515P |
| 1520 | S | S.Psp2021ORF30365P (100% identity) | GTANNNNNNGTCY | S.PaeC42ORF1515P |
| 1525 | dynamin family protein | |||
| 12730 | MerR family transcriptional regulator | |||
| 12740 | M | M.Psp2021ORF6515P (100% identity) | CCCANNNNNNTCG | M.PaeC42ORF12740P |
| 12745 | S | S.Psp2021ORF6515P (100% identity) | CCCANNNNNNTCG | S.PaeC42ORF12740P |
| 12750 | anti-phage defense ZorAB system protein ZorA | |||
| 12755 | OmpA family protein | |||
| 12760 | EH signature domain-containing protein | |||
| 12765 | DEAD/DEAH box helicase | |||
| 12770 | AAA family ATPase | |||
| 12775 | McrC family protein | |||
| 12780 | R | Psp2021ORF6515P (99% identity) | CCCANNNNNNTCG | PaeC42ORF12740P |
| 12785 | integrase | |||
| 33275 | endonuclease NucS | |||
| 33280 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeC42ORF33285P |
| 33285 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaeC42ORF33285P |
| 33290 | HNH endonuclease | |||
| 33295 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeC42ORF33285P |
| 33300 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11840 | 442 aa hypothetical protein | |||
| 11845 | M | M.PspB111ORF7090P (99% identity) | M.PaeC42ORF11845P | |
| 11850 | 160 aa hypothetical protein | |||
| 24445 | nucleoid-associated protein YejK | |||
| 24450 | M | M.Psp2021ORF21530P (100% identity) | M.PaeC42ORF24450P | |
| 24455 | Arc family DNA-binding protein | |||
| 26515 | 172 aa hypothetical protein | |||
| 26520 | RM | Pba1013ORF18180P (100% identity) | PaeC42ORF26520P | |
| 26525 | MerR family transcriptional regulator | |||
| 26655 | ATP-binding domain-containing protein | |||
| 26660 | RM | Ssp91ORF13560P (79% identity) | PaeC42ORF26660P | |
| 26665 | DUF262 domain-containing HNH endonuclease family | |||
| 28635 | nucleoid-associated protein YejK | |||
| 28640 | M | M.PspHORFAP (100% identity) | M.PaeC42ORF28640P | |
| 28645 | Arc family DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12765 | DEAD/DEAH box helicase | |||
| 12770 | R | PaeF023McrBP (100% identity) | PaeC42McrBP | |
| 12775 | R | Psp2021McrCP (100% identity) | PaeC42McrCP | |
| 12780 | type I restriction endonuclease subunit R | |||