Klebsiella pneumoniae SYCC2 |
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Putative Klebsiella pneumoniae SYCC2 RM systems
Ref: Yin,Y. and Li,R. unpublished
REBASE ref # 35787
| Sequence length: | GenBank #: | |
| Chromosome: | 5,316,115 bp | CP113191 |
| plasmid pSYCC2_tmex_279k: | 279,422 bp | CP113186 |
REBASE acronym: KpnSYCC2
Org_num: 63763
All begin OT482_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5095 | integrase arm-type DNA-binding domain-containing | |||
| 5100 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | KpnSYCC2ORF5105P |
| 5105 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.KpnSYCC2ORF5105P |
| 5110 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.KpnSYCC2ORF5105P |
| 5115 | helicase-related protein | |||
| 24830 | ATP-dependent endonuclease | |||
| 24835 | S | S2.Kpnu34ORF4855P (100% identity) | S2.KpnSYCC2ORF24840P | |
| 24840 | M | M.Kpnu34ORF4855P (100% identity) | M.KpnSYCC2ORF24840P | |
| 24845 | S | S1.Kpnu34ORF4855P (100% identity) | CATCNNNNNNTTYG | S1.KpnSYCC2ORF24840P |
| 24850 | R | Kpnu34ORF4855P (100% identity) | KpnSYCC2ORF24840P | |
| 24855 | YaaW family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8600 | dcm methylase | |||
| 8605 | M | M.KpnY01ORF9760P (100% identity) | M.KpnSYCC2ORF8605P | |
| 8610 | DUF1317 family protein | |||
| 12545 | 3-5 exoribonuclease | |||
| 12550 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.KpnSYCC2ORF12550P |
| 12555 | replication endonuclease | |||
| 19215 | drug/metabolite exporter YedA | |||
| 19220 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnSYCC2DcmP |
| 19225 | M | M.Kpnst69DcmP (100% identity) | CCWGG | M.KpnSYCC2DcmP |
| 19230 | phosphohydrolase | |||
| 22065 | replication endonuclease | |||
| 22070 | M | M.Kpnu34ORF7640P (100% identity) | GATC | M.KpnSYCC2ORF22070P |
| 22075 | TraR/DksA family transcriptional regulator | |||
| 26360 | ribulose-phosphate 3-epimerase | |||
| 26365 | M | M.KspC31DamP (100% identity) | GATC | M.KpnSYCC2DamP |
| 26370 | cell division protein DamX | |||
| plasmid pSYCC2_tmex_279k | ||||
| 1375 | DNA replication protein DnaC | |||
| 1380 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnSYCC2ORF1380P |
| 1385 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnSYCC2ORF1380P |
| 1390 | 82 aa hypothetical protein | |||
| 1455 | 250 aa hypothetical protein | |||
| 1460 | M | M.Sen20597ORF9240P (100% identity) | M.KpnSYCC2ORF1460P | |
| 1465 | 1025 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5130 | STY4851/ECs_5259 family protein | |||
| 5135 | R | Ksp4251MrrP (100% identity) | KpnSYCC2MrrP | |
| 5140 | IS3 family transposase | |||