Klebsiella pneumoniae SYCC6-1 |
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Putative Klebsiella pneumoniae SYCC6-1 RM systems
Ref: Yin,Y. and Li,R. unpublished
REBASE ref # 35787
| Sequence length: | GenBank #: | |
| Chromosome: | 5,256,371 bp | CP113222 |
| plasmid pSYCC6-1_3: | 211,710 bp | CP113223 |
| plasmid pSYCC6-1_4: | 53,691 bp | CP113224 |
| plasmid pSYCC6-1_tmex_306k: | 306,166 bp | CP113221 |
REBASE acronym: KpnSYCC61
Org_num: 63765
All begin OS910_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3565 | serine/threonine protein kinase | |||
| 3570 | M | M.KpnyORFBP (100% identity) | TTACNNNNNTAG | M.KpnSYCC61ORF3570P |
| 3575 | S | S.KpnyORFBP (100% identity) | TTACNNNNNTAG | S.KpnSYCC61ORF3570P |
| 3580 | R | KpnyORFBP (100% identity) | TTACNNNNNTAG | KpnSYCC61ORF3570P |
| 3585 | 580 aa hypothetical protein | |||
| plasmid pSYCC6-1_3 | ||||
| 27610 | SprT family zinc-dependent metalloprotease | |||
| 27615 | R | SmaQC11ORF51970P (100% identity) | KpnSYCC61ORF27635P | |
| 27620 | YecA family protein | |||
| 27625 | S | S.Kqu5BL06ORF30990P (55% identity) | S2.KpnSYCC61ORF27635P | |
| 27630 | S | S1.KquYZ22ORF26570P (39% identity) | S1.KpnSYCC61ORF27635P | |
| 27635 | M | M.KquYZ22ORF26570P (100% identity) | M.KpnSYCC61ORF27635P | |
| 27640 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3595 | 239 aa hypothetical protein | |||
| 3600 | R | KpnyORFAP (100% identity) | GAAC | KpnSYCC61ORF3600P |
| 3605 | integrase arm-type DNA-binding domain-containing | |||
| 8380 | cell division protein DamX | |||
| 8385 | M | M.KspC31DamP (100% identity) | GATC | M.KpnSYCC61DamP |
| 8390 | ribulose-phosphate 3-epimerase | |||
| 12750 | 71 aa hypothetical protein | |||
| 12755 | M | M.Kpns110ORF6220P (83% identity) | M.KpnSYCC61ORF12755P | |
| 12760 | 339 aa hypothetical protein | |||
| 15415 | phosphohydrolase | |||
| 15420 | M | M.KpnFF88DcmP (100% identity) | CCWGG | M.KpnSYCC61DcmP |
| 15425 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnSYCC61DcmP |
| 15430 | drug/metabolite exporter YedA | |||
| 22835 | 54 aa hypothetical protein | |||
| 22840 | M | M.Kva19ORF21490P (99% identity) | M.KpnSYCC61ORF22840P | |
| 22845 | 3-5 exoribonuclease | |||
| 26030 | helix-turn-helix domain-containing protein | |||
| 26035 | M | M.KpnTH07ORF19450P (100% identity) | M.KpnSYCC61ORF26035P | |
| 26040 | 73 aa hypothetical protein | |||
| plasmid pSYCC6-1_4 | ||||
| 28715 | IS1 family transposase | |||
| 28720 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnSYCC61ORF28720P |
| 28725 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnSYCC61ORF28720P |
| 28730 | EAL domain-containing protein | |||
| plasmid pSYCC6-1_tmex_306k | ||||
| 925 | 82 aa hypothetical protein | |||
| 930 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnSYCC61ORF935P |
| 935 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnSYCC61ORF935P |
| 940 | DNA replication protein DnaC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3535 | IS3 family transposase | |||
| 3540 | R | KpnyMcrBP (98% identity) | KpnSYCC61McrB2P | |
| 3545 | R | Kpntgc02McrCP (100% identity) | KpnSYCC61McrC2P | |
| 3550 | IS3 family transposase | |||
| plasmid pSYCC6-1_3 | ||||
| 28375 | IS3-like element ISKpn38 family transposase | |||
| 28380 | R | Rte104AMcrBP (100% identity) | KpnSYCC61McrBP | |
| 28385 | R | RorCRE01McrC2P (100% identity) | KpnSYCC61McrCP | |
| 28390 | IS5 family transposase | |||