Methylococcus species 16-5 |
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Putative Methylococcus species 16-5 RM systems
Ref: Awala,S.I. and Rhee,S.-K. unpublished
REBASE ref # 35656
Complete sequence: 4,343,116 bp
GenBank #: CP110921
REBASE acronym: Msp165
Org_num: 63326
All begin OOT43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10015 | tetratricopeptide repeat protein | |||
| 10020 | M | M.NspPLL12ORF12045P (80% identity) | TACNNNNNNGTGG | M.Msp165II |
| 10025 | DUF3037 domain-containing protein | |||
| 10030 | 244 aa hypothetical protein | |||
| 10035 | S | S.Nsp596ORF21895P (26% identity) | TACNNNNNNGTGG | S.Msp165II |
| 10040 | 52 aa hypothetical protein | |||
| 10045 | type II toxin-antitoxin system RelE/ParE family | |||
| 10050 | type II toxin-antitoxin system | |||
| 10055 | R | ScaJ1AORFEP (84% identity) | TACNNNNNNGTGG | Msp165IIP |
| 10060 | protein disulfide oxidoreductase | |||
| 11775 | methylenetetrahydrofolate reductase [NAD(P)H] | |||
| 11780 | R | MspEFPC2ORF1420P (93% identity) | Msp165ORF11805P | |
| 11785 | S | S1.TspsG1ORF1455P (65% identity) | S.Msp165ORF11805P | |
| 11790 | transposase | |||
| 11795 | IS3 family transposase | |||
| 11800 | transposase | |||
| 11805 | M | M.Pba1013ORF18075P (36% identity) | M.Msp165ORF11805P | |
| 11810 | RNA polymerase sigma factor RpoH | |||
| 14185 | SlyX family protein | |||
| 14190 | M | M.Afe6S08ORF13725P (81% identity) | CTCANNNNNCTC | M.Msp165I |
| 14195 | S | S.Ssp7502ORFAP (46% identity) | CTCANNNNNCTC | S1.Msp165I |
| 14200 | DNA binding domain-containing protein | |||
| 14205 | S | S2.Ssp1004ORF14295P (21% identity) | S2.Msp165IP | |
| 14210 | toxin-antitoxin system HicB family antitoxin | |||
| 14215 | toxin-antitoxin system toxin component, | |||
| 14225 | R | GspM18ORF2872P (75% identity) | CTCANNNNNCTC | Msp165IP |
| 14230 | 126 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 150 | 260 aa hypothetical protein | |||
| 155 | M | M.Cta51KORFCP (52% identity) | M.Msp165ORF155P | |
| 160 | PBSX family phage terminase large subunit | |||
| 3365 | helicase-related protein | |||
| 3370 | RM | Bmu1ORF5778P (65% identity) | Msp165ORF3370P | |
| 3375 | DNA-processing protein DprA | |||
| 9115 | transcriptional regulator | |||
| 9120 | M | M2.Msp165ORF15485P (99% identity) | M1.Msp165ORF9120P | |
| 9125 | helix-turn-helix transcriptional regulator | |||
| 9130 | type II toxin-antitoxin system RelE/ParE family | |||
| 9135 | type II toxin-antitoxin system | |||
| 9140 | M | M1.Msp165ORF15485P (97% identity) | M2.Msp165ORF9120P | |
| 9145 | type II toxin-antitoxin system RelE/ParE family | |||
| 12165 | DUF4376 domain-containing protein | |||
| 12170 | M | M.McaNorORF503P (94% identity) | M.Msp165ORF12170P | |
| 12175 | S8 family serine peptidase | |||
| 15315 | AAA domain-containing protein | |||
| 15320 | M | M.RspOR214ORF1702P (78% identity) | M.Msp165ORF15320P | |
| 15325 | 280 aa hypothetical protein | |||
| 15480 | type II toxin-antitoxin system RelE/ParE family | |||
| 15485 | M | M2.Msp165ORF9120P (97% identity) | M1.Msp165ORF15485P | |
| 15490 | type II toxin-antitoxin system | |||
| 15495 | type II toxin-antitoxin system RelE/ParE family | |||
| 15500 | helix-turn-helix transcriptional regulator | |||
| 15505 | M | M1.Msp165ORF9120P (99% identity) | M2.Msp165ORF15485P | |
| 15510 | DNA-binding transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15290 | ATP-dependent DNA helicase | |||
| 15295 | M | M.BpsV32ORF1885P (17% identity) | M.Msp165ORF15295AP | |
| 15300 | IS3 family transposase | |||
| 15305 | M | M.Bgl18963ORF1910P (65% identity) | M.Msp165ORF15295BP | |
| 15310 | R | RtaDMF7ORF18960P (93% identity) | Msp165ORF15295P | |
| 15315 | AAA domain-containing protein | |||