Salmonella enterica subsp. enterica S2122 |
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Putative Salmonella enterica subsp. enterica S2122 RM systems
Ref: Yue,M. unpublished
REBASE ref # 30996
| Sequence length: | GenBank #: | |
| Chromosome: | 4,940,513 bp | CP110657 |
| plasmid pS2122_1: | 271,960 bp | CP110658 |
REBASE acronym: Sen2122
Org_num: 63173
All begin OOK64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14200 | endoribonuclease SymE | |||
| 14205 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen2122ORF14210P |
| 14210 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen2122ORF14210P |
| 14215 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen2122ORF14210P |
| 14220 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 885 | drug/metabolite exporter YedA | |||
| 890 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen2122DcmP |
| 895 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen2122DcmP |
| 900 | phosphohydrolase | |||
| 4510 | DUF551 domain-containing protein | |||
| 4515 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen2122ORF4515P |
| 4520 | ead/Ea22-like family protein | |||
| 4740 | ribosome-associated translation inhibitor RaiA | |||
| 4745 | M | M.SenYU39ORF1896P (100% identity) | M.Sen2122ORF4745P | |
| 4750 | Com family DNA-binding transcriptional | |||
| 8020 | DNA-binding transcriptional regulator Fis | |||
| 8025 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2122ORF8025P |
| 8030 | DUF2556 family protein | |||
| 8515 | ribulose-phosphate 3-epimerase | |||
| 8520 | M | M.StyTDamP (100% identity) | GATC | M.Sen2122DamP |
| 8525 | cell division protein DamX | |||
| 14050 | AAA family ATPase | |||
| 14055 | RM | StyUK1IV (100% identity) | GATCAG | Sen2122ORF14055P |
| 14060 | BREX system P-loop protein BrxC | |||
| plasmid pS2122_1 | ||||
| 24825 | 55 aa hypothetical protein | |||
| 24830 | M | M.YpsF1ORFCP (56% identity) | M.Sen2122ORF24830P | |
| 24835 | IS6-like element IS26 family transposase | |||
| 25330 | IS6-like element IS26 family transposase | |||
| 25335 | M | M.StyCORF187P (49% identity) | M.Sen2122ORF25335P | |
| 25340 | thermonuclease family protein | |||
| 25720 | DNA-binding protein | |||
| 25725 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen2122ORF25725P |
| 25730 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16740 | MFS transporter | |||
| 16745 | M | M.StyUK1I (99% identity) | CAGAG | M.Sen2122ORF16745P |
| 16750 | R | StyUK1IP (99% identity) | CAGAG | Sen2122ORF16745P |
| 16755 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14025 | AAA domain-containing protein | |||
| 14030 | R | StyLTMrrP (100% identity) | Sen2122MrrP | |
| 14035 | protease Lon-related BREX system protein BrxL | |||
| 14215 | type I restriction-modification system | |||
| 14220 | R | StyUK1MrrP (100% identity) | Sen2122Mrr2P | |
| 14225 | BrnT family toxin | |||