Klebsiella pneumoniae KSB1_5B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae KSB1_5B RM systems
Ref: Foster-Nyarko,E. et al. unpublished
REBASE ref # 31476
| Sequence length: | GenBank #: | |
| Chromosome: | 93,264 bp | CP110554 |
| Chromosome: | 5,260,710 bp | CP110547 |
| plasmid pKSB1_5B.4: | 90,329 bp | CP110552 |
REBASE acronym: Kpn15B
Org_num: 45673
All begin JMW79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23340 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.Kpn15BORF23345P |
| 23345 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.Kpn15BORF23345P |
| 23350 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | Kpn15BORF23345P |
| 23355 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 28205 | PerC family transcriptional regulator | |||
| 28210 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Kpn15BORF28210P |
| 28215 | LexA family transcriptional regulator | |||
| Chromosome | ||||
| 2475 | cell division protein DamX | |||
| 2480 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn15BDamP |
| 2485 | ribulose-phosphate 3-epimerase | |||
| 6600 | TraR/DksA family transcriptional regulator | |||
| 6605 | M | M.Kpnu34ORF7640P (100% identity) | GATC | M.Kpn15BORFBP |
| 6610 | replication endonuclease | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.Kpnst69DcmP (100% identity) | CCWGG | M.Kpn15BDcmP |
| 9460 | V | V.KspC31DcmP (75% identity) | CCWGG | V.Kpn15BDcmP |
| 9465 | drug/metabolite exporter YedA | |||
| 15565 | 77 aa hypothetical protein | |||
| 15570 | M | M.KvaS01ORF14030P (100% identity) | M.Kpn15BORFAP | |
| 15575 | 78 aa hypothetical protein | |||
| 16475 | replication endonuclease | |||
| 16480 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.Kpn15BORFDP |
| 16485 | 3-5 exoribonuclease | |||
| plasmid pKSB1_5B.4 | ||||
| 27820 | 73 aa hypothetical protein | |||
| 27825 | M | M.EcoSCU479ORF25180P (96% identity) | SAY | M.Kpn15BORF27825P |
| 27830 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23320 | IS3 family transposase | |||
| 23325 | R | Ksp4251MrrP (100% identity) | Kpn15BMrr2P | |
| 23330 | STY4851/ECs_5259 family protein | |||