Escherichia coli TR_AVFP-4 |
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Putative Escherichia coli TR_AVFP-4 RM systems
Ref: Goncuoglu,M. et al. unpublished
REBASE ref # 35541
Complete sequence: 4,891,576 bp
GenBank #: CP110094
REBASE acronym: EcoAVFP4
Org_num: 62916
All begin OF865_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.EcosC41ORF5210P (100% identity) | M.EcoAVFP4ORFCP | |
| ??? | S | S.SflN101ORF11895P (13% identity) | S.EcoAVFP4ORFCP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2660 | IS3 family transposase | |||
| 2680 | M | M.EcoAVFP4ORFFP (86% identity) | M.EcoAVFP4ORF2680P | |
| 2685 | TrmB family transcriptional regulator | |||
| ??? | M | M.EcoAVFP4ORF2680P (86% identity) | M.EcoAVFP4ORFFP | |
| 8815 | LexA family transcriptional regulator | |||
| 8820 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoAVFP4ORFEP |
| 8825 | PerC family transcriptional regulator | |||
| ??? | R | EcoRes11ORFCP (99% identity) | EcoAVFP4ORFDP | |
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoAVFP4DamP |
| ??? | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoAVFP4ORFBP |
| ??? | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoAVFP4DcmP |
| ??? | V | V.Sdy49550DcmP (100% identity) | CCWGG | V.EcoAVFP4DcmP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | EcoSMBLMcrBP (100% identity) | EcoAVFP4McrBP | |
| ??? | R | EcoHH97McrCP (95% identity) | EcoAVFP4McrCP | |