Salmonella enterica SE20-C72-2 |
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Putative Salmonella enterica SE20-C72-2 RM systems
Ref: Nakayama,T. et al. unpublished
REBASE ref # 35615
| Sequence length: | GenBank #: | |
| Chromosome: | 4,720,010 bp | AP026948 |
| plasmid pSE20-C72-2-1: | 256,294 bp | AP026949 |
| plasmid pSE20-C72-2-4: | 9,869 bp | AP026952 |
REBASE acronym: SenC722
Org_num: 63172
All begin SE2072C2_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4370 | 54 aa hypothetical protein | |||
| 4380 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC722ORF4380P |
| 4390 | DNA-binding protein Fis | |||
| 8920 | 100 aa hypothetical protein | |||
| 8930 | M | M.Ero0401ORF7075P (99% identity) | M.SenC722ORF8930P | |
| 8940 | DUF1317 domain-containing protein | |||
| 37920 | 77 aa hypothetical protein | |||
| 37930 | R | Ssp918ORF19230P (99% identity) | CCWGG | SenC722ORF37940P |
| 37940 | M | M.Ssp918ORF19230P (100% identity) | CCWGG | M.SenC722ORF37940P |
| 37950 | DNA helicase | |||
| 40770 | LexA family transcriptional regulator | |||
| 40780 | M | M.Sso90ORF15820P (100% identity) | GATC | M.SenC722ORF40780P |
| 40790 | replication protein | |||
| plasmid pSE20-C72-2-1 | ||||
| 46640 | 108 aa hypothetical protein | |||
| 46650 | M | M.YpsF1ORFBP (100% identity) | M.SenC722ORF46650P | |
| 46660 | 202 aa hypothetical protein | |||
| 46930 | IS21 family transposase | |||
| ??? | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenC722ORF46940P |
| 46950 | 85 aa hypothetical protein | |||
| plasmid pSE20-C72-2-4 | ||||
| 48510 | 194 aa hypothetical protein | |||
| 48520 | RM | KmiKO408ORF30920P (55% identity) | SenC722ORF48520P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33310 | cytochrome ubiquinol oxidase subunit I | |||
| 33320 | R | Sens679ORF16435P (100% identity) | CAGAG | SenC722ORF33330P |
| 33330 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.SenC722ORF33330P |
| 33340 | MFS transporter | |||