Escherichia coli DFS.1 |
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Putative Escherichia coli DFS.1 RM systems
Ref: Sun,Y. unpublished
REBASE ref # 32922
| Sequence length: | GenBank #: | |
| Chromosome: | 4,944,989 bp | CP104846 |
| plasmid unnamed1: | 92,732 bp | CP104847 |
REBASE acronym: EcoDFS1
Org_num: 62241
All begin N7219_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4050 | endoribonuclease SymE | |||
| 4055 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoDFS1ORF4065P |
| 4060 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoDFS1ORF4065P |
| 4065 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoDFS1ORF4065P |
| 4070 | restriction endonuclease | |||
| 6245 | ash family protein | |||
| 6250 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoDFS1ORF6255P |
| 6255 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoDFS1ORF6255P |
| 6260 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoDFS1ORF6255P |
| 6265 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDFS1DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoDFS1ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 4275 | PerC family transcriptional regulator | |||
| 4280 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoDFS1ORF4280P |
| 4285 | LexA family transcriptional regulator | |||
| 4310 | 67 aa hypothetical protein | |||
| 4315 | M | M.Ecoppa6ORF4450P (100% identity) | M.EcoDFS1ORF4315P | |
| 4320 | 63 aa hypothetical protein | |||
| 9730 | 71 aa hypothetical protein | |||
| 9735 | M | M.KpnYN1ORFGP (89% identity) | M.EcoDFS1ORF9735P | |
| 9740 | helix-turn-helix domain-containing protein | |||
| 11995 | TrmB family transcriptional regulator | |||
| 12000 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoDFS1ORF12000P |
| 12015 | DUF3927 family protein | |||
| plasmid unnamed1 | ||||
| 24470 | 103 aa hypothetical protein | |||
| 24475 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoDFS1ORF24475P |
| 24480 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4065 | type I restriction-modification system subunit | |||
| 4070 | R | Ecou021MrrP (100% identity) | EcoDFS1MrrP | |
| 4075 | BrnT family toxin | |||