Salmonella enterica 1019942 |
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Putative Salmonella enterica 1019942 RM systems
Ref: Sangster,A. et al. unpublished
REBASE ref # 35304
Complete sequence: 4,719,041 bp
GenBank #: CP104641
REBASE acronym: Sen9942
Org_num: 62309
All begin N5927_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19715 | NERD domain-containing protein | |||
| 19720 | S | S1.SenSA617ORF19495P (100% identity) | S2.Sen9942ORF19740P | |
| 19725 | SAM-dependent methyltransferase | |||
| 19730 | 44 aa hypothetical protein | |||
| 19735 | restriction endonuclease | |||
| 19740 | M | M.StySBLI (100% identity) | M.Sen9942ORF19740P | |
| 19745 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S1.Sen9942ORF19740P |
| 19750 | R | StySBLI (100% identity) | Sen9942ORF19740P | |
| 19755 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen9942DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9942ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 5445 | TraR/DksA family transcriptional regulator | |||
| 5450 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen9942ORF5450P |
| 5455 | replication endonuclease | |||
| 13785 | drug/metabolite exporter YedA | |||
| 13790 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen9942DcmP |
| 13795 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen9942DcmP |
| 13800 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17330 | small effector SsaA | |||
| 17335 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Sen9942ORF17340P |
| 17340 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen9942ORF17340P |
| 17345 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19730 | 44 aa hypothetical protein | |||
| 19735 | R | Ssp3CMrrP (100% identity) | Sen9942MrrP | |
| 19740 | type I restriction-modification system subunit | |||