Escherichia coli 2022CK-00450 |
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Putative Escherichia coli 2022CK-00450 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 4,856,360 bp | CP104681 |
| plasmid unnamed1: | 210,107 bp | CP104682 |
| plasmid unnamed2: | 122,304 bp | CP104683 |
REBASE acronym: Eco450
Org_num: 62236
All begin N5922_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1890 | cell division protein DamX | |||
| 1895 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco450DamP |
| 1900 | ribulose-phosphate 3-epimerase | |||
| 2525 | DUF2556 family protein | |||
| 2530 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco450ORF2530P |
| 2535 | site-specific integrase | |||
| 9360 | phosphohydrolase | |||
| 9365 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco450DcmP |
| 9370 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco450DcmP |
| 9375 | drug/metabolite exporter YedA | |||
| 11450 | DUF977 family protein | |||
| 11455 | M | M.Ecoi029ORF11125P (100% identity) | M.Eco450ORF11455P | |
| 11460 | 139 aa hypothetical protein | |||
| 15685 | replication endonuclease | |||
| 15690 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco450ORF15690P |
| 15695 | TraR/DksA family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24085 | 120 aa hypothetical protein | |||
| 24090 | M | M.Sma6556ORF27745P (100% identity) | M.Eco450ORF24090P | |
| 24095 | 143 aa hypothetical protein | |||
| 24500 | 100 aa hypothetical protein | |||
| 24505 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Eco450ORF24505P |
| 24510 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19110 | integrase core domain-containing protein | |||
| 19115 | R | Eco65MSORFAP (100% identity) | Eco450ORF19120P | |
| 19120 | M | M.Eco45ORF22010P (100% identity) | M.Eco450ORF19120P | |
| 19125 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20655 | IS1-like element IS1A family transposase | |||
| 20660 | R | SflLIN8GmrSDP (35% identity) | Eco450GmrSDP | |
| 20665 | R | SflLIN8GmrSDP (42% identity) | Eco450GmrSP | |
| 20670 | cytoplasmic protein | |||
| plasmid unnamed1 | ||||
| 24710 | recombinase family protein | |||
| 24715 | R | Hpa2461ORFIP (89% identity) | Eco450ORF24715P | |
| 24720 | 74 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25565 | IS110 family transposase | |||
| 25570 | R | PgeFB2McrC2P (100% identity) | Eco450McrCP | |
| 25575 | R | KpnM9111McrBP (100% identity) | Eco450McrBP | |
| 25580 | IS3-like element ISKpn38 family transposase | |||