Pseudomonas aeruginosa WTJH36 |
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Putative Pseudomonas aeruginosa WTJH36 RM systems
Ref: Nanfei,W. unpublished
REBASE ref # 35094
| Sequence length: | GenBank #: | |
| Chromosome: | 7,094,521 bp | CP104590 |
| plasmid pWTJH36: | 462,066 bp | CP104591 |
REBASE acronym: PaeJH36
Org_num: 62298
All begin N5878_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12710 | AAA family ATPase | |||
| 12715 | S | S.PaeZM03ORFDP (100% identity) | CYYANNNNNNCTTC | S.PaeJH36ORF12720P |
| 12720 | M | M.PaeZM03ORFDP (100% identity) | CYYANNNNNNCTTC | M.PaeJH36ORF12720P |
| 12725 | DNA recombination protein RmuC | |||
| 12730 | R | PaePA41ORFDP (100% identity) | CYYANNNNNNCTTC | PaeJH36ORF12720P |
| 12735 | sigma-54 dependent transcriptional regulator | |||
| plasmid pWTJH36 | ||||
| 34830 | IS5 family transposase | |||
| 34835 | S | S.PaeJH6ORF32160P (100% identity) | S.PaeJH36ORF34840P | |
| 34840 | M | M.PaeJH6ORF14365P (99% identity) | M.PaeJH36ORF34840P | |
| 34845 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 830 | 147 aa hypothetical protein | |||
| 835 | M | M2.PaeCH45ORF15505P (100% identity) | M1.PaeJH36ORF835P | |
| 840 | M | M.PaeF010ORF20060P (100% identity) | M2.PaeJH36ORF835P | |
| 845 | AAA family ATPase | |||
| 1145 | site-specific integrase | |||
| 1150 | M | M.PaePALA9ORF2532P (100% identity) | M.PaeJH36ORF1150P | |
| 1155 | 83 aa hypothetical protein | |||
| 1905 | 185 aa hypothetical protein | |||
| 1910 | M | M.PspspA2ORF8225P (100% identity) | M.PaeJH36ORF1910P | |
| 1915 | DNA topoisomerase III | |||
| 6985 | HNH endonuclease | |||
| 6990 | M | M.PaeCH42ORF20705P (100% identity) | M.PaeJH36ORF6990P | |
| 6995 | 165 aa hypothetical protein | |||
| 15670 | 247 aa hypothetical protein | |||
| 15675 | RM | PaePALA9ORF5550P (56% identity) | PaeJH36ORF15675P | |
| 15680 | chromosome segregation protein SMC | |||
| 22300 | 62 aa hypothetical protein | |||
| 22305 | M | M.PspS53aORFAP (100% identity) | M.PaeJH36ORF22305P | |
| 22310 | class I SAM-dependent methyltransferase | |||
| plasmid pWTJH36 | ||||
| 33310 | 256 aa hypothetical protein | |||
| 33315 | M | M.SstCSW02ORF23265P (100% identity) | M.PaeJH36ORF33315P | |
| 33320 | 118 aa hypothetical protein | |||