Pseudomonas aeruginosa WTJH6 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa WTJH6 RM systems
Ref: Nanfei,W. unpublished
REBASE ref # 35094
| Sequence length: | GenBank #: | |
| Chromosome: | 6,757,988 bp | CP104586 |
| plasmid pWTJH6: | 426,499 bp | CP104587 |
REBASE acronym: PaeJH6
Org_num: 62299
All begin N5877_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14355 | IS5 family transposase | |||
| 14360 | S | S.PaeJH6ORF32160P (100% identity) | S.PaeJH6ORF14365P | |
| 14365 | M | M.PaeJH36ORF21125P (100% identity) | M.PaeJH6ORF14365P | |
| 14370 | site-specific integrase | |||
| plasmid pWTJH6 | ||||
| 32155 | site-specific integrase | |||
| 32160 | M | M.PaeJH6ORF14365P (99% identity) | M.PaeJH6ORF32160P | |
| 32165 | S | S.PaeJH6ORF28270P (100% identity) | S.PaeJH6ORF32160P | |
| 32170 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3290 | 108 aa hypothetical protein | |||
| 3295 | M | M.PaeR11ORF12365P (98% identity) | M.PaeJH6ORF3295P | |
| 3300 | 57 aa hypothetical protein | |||
| 9935 | AAA family ATPase | |||
| 9940 | M | M.PaePA57ORF4740P (100% identity) | M.PaeJH6ORF9940P | |
| 9945 | 351 aa hypothetical protein | |||
| 9950 | R | PaePA57ORF4740P (100% identity) | PaeJH6ORF9940P | |
| 9955 | 221 aa hypothetical protein | |||
| 22900 | AlpA family transcriptional regulator | |||
| 22905 | RM | PaeID40ORF1928P (100% identity) | PaeJH6ORF22905P | |
| 22910 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pWTJH6 | ||||
| 33535 | 118 aa hypothetical protein | |||
| 33540 | M | M.SstCSW02ORF23265P (100% identity) | M.PaeJH6ORF33540P | |
| 33545 | 256 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2575 | DUF262 domain-containing HNH endonuclease family | |||
| 2580 | R | PaePA298ORF14645P (100% identity) | AACACC | PaeJH6ORF2585P |
| 2585 | M | M.PaePA298ORF14645P (99% identity) | AACACC | M.PaeJH6ORF2585P |
| 2590 | DUF4391 domain-containing protein | |||