Vibrio species J502 |
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Putative Vibrio species J502 RM systems
Ref: Wells,E. and Santander,J. unpublished
REBASE ref # 35408
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,366,281 bp | CP104554 |
| chromosome 2: | 1,156,834 bp | CP104555 |
REBASE acronym: VspJ502
Org_num: 62415
All begin N5E84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3095 | transcription factor | |||
| 3100 | M | M.VanVIB43ORF10525P (100% identity) | M.VspJ502ORF3100P | |
| 3105 | S | S.VanVIB43ORF10525P (100% identity) | S.VspJ502ORF3100P | |
| 3110 | histidinol-phosphatase | |||
| 3115 | DNA binding domain-containing protein | |||
| 3120 | R | VanVIB43ORF10525P (100% identity) | VspJ502ORF3100P | |
| 3125 | M48 family metallopeptidase | |||
| 8890 | AAA family ATPase | |||
| 8895 | S | S.VanVIB43ORF4500P (100% identity) | S.VspJ502ORF8900P | |
| 8900 | M | M.VanVIB43ORF4500P (100% identity) | M.VspJ502ORF8900P | |
| 8905 | R | VanVIB43ORF4500P (100% identity) | VspJ502ORF8900P | |
| 8910 | restriction endonuclease | |||
| chromosome 2 | ||||
| 17540 | sigma 54-interacting transcriptional regulator | |||
| 17545 | R | VanVIB43ORF19530P (100% identity) | VspJ502ORF17550P | |
| 17550 | M | M.VanVIB43ORF19530P (100% identity) | M.VspJ502ORF17550P | |
| 17555 | S | S.VanVIB43ORF19530P (100% identity) | S.VspJ502ORF17550P | |
| 17560 | STY4851/ECs_5259 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4155 | exodeoxyribonuclease III | |||
| 4160 | M | M.VanVIB43ORF9450P (100% identity) | GTCGAC | M.VspJ502ORF4160P |
| 4165 | R | VanVIB43ORF9450P (98% identity) | GTCGAC | VspJ502ORF4160P |
| 4170 | 135 aa hypothetical protein | |||
| 9190 | ATP-binding protein | |||
| 9195 | M | M.VanVIB43ORF4230P (100% identity) | M.VspJ502ORF9195P | |
| 9200 | HNH endonuclease | |||
| 14820 | SPOR domain-containing protein | |||
| 14825 | M | M.VanVIB43ORF13565P (100% identity) | GATC | M.VspJ502DamP |
| 14830 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8905 | type I restriction-modification system | |||
| 8910 | R | VanHI610ORF13705P (100% identity) | VspJ502ORF8910P | |
| 8915 | helix-turn-helix domain-containing protein | |||
| 9265 | class I SAM-dependent methyltransferase | |||
| 9270 | R | VanFF93ORF14380P (98% identity) | VspJ502ORF9270P | |
| 9275 | transcriptional regulator | |||